Populus nigra (Lombardy poplar): 133691660
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Entry
133691660 CDS
T10372
Name
(RefSeq) F-box protein SKIP17-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133691660
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133691660
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
133691660
NCBI-ProteinID:
XP_061968243
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Position
4:3521389..3527760
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AA seq
527 aa
AA seq
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MDTLLHTPTSMAKRPCSFPSSPSPSPNPNMNNQLDNLLRTFLNLADSPSLSIDHSFEHLL
ESSPCDADKSLLIDRALKLGSLLLEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLDTQ
SLCYAAATCSMFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALLSLKLGIVPG
PIMSRGSCQPMVYGIQNAVEVSNFSWNDKKTRQGKESSILSRSCLNPLSGDSGAAGAVLR
GLHLYNIERIDNTSLCGALSACPSLLDLEIIGLHVELRQTLVSVSMNCPLIERLFFESSK
TGRDDSLKSPTCVELVNNCPNLTSLALRGFKLYDYKLRILVKGFRKLKYVDFSTSYSITG
SFLRNLGGNIGGSLLEVMILRDCIHLKELEVARLLTSVLAGDFKYLQHLDISNREGLAAA
GDSYGRCYSSSIIPMKQVLEERPEICLLAEFPSEGSFIDISQMTDSDLNSEVSLSSLLSS
IASDGSSFMYTSESNYSSDQTSGNEEGRDSGYVVCEESSDEYDYLLG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggataccctcctccacaccccaacttccatggccaagcgtccctgctcttttccttcc
tctccctctccctccccaaaccctaacatgaacaatcaactcgataatctcctccgaact
tttcttaacctcgctgactctccttctctgtccatcgaccactccttcgagcatctcctc
gagtcctccccttgcgatgctgataagtctctcctcatcgatcgcgcccttaaattagga
tcgctgcttcttgaagccggcaagcgctctgctaggaaacgctcttctgttcataattca
ctcacttgggctctccctcccgatctcaccatcaaggtgctttccatgcttgatacacaa
agcctgtgctatgctgctgcaacttgttcaatgttctacaaatgtgccatggatcccttg
tgctatgctaatattgacttgacgactgttgtcccaaaagttaataacgctgttgtgtct
acaatgatccagcgtgctgggaaagcgcttctgtctcttaagcttggtatagttccaggt
ccaattatgtctcgtggatcttgtcaaccgatggtatatggcatccagaacgctgtagaa
gtgtccaacttttcatggaatgataaaaagaccagacaggggaaggagtcatcgattctt
agtagatcctgcttaaatcctttaagtggcgacagtggtgctgctggggctgttttgaga
ggtttgcatttatacaatattgaaagaattgacaacacatctctctgtggggcattgtca
gcctgcccatctctgcttgatctggaaataattggcctacatgttgagctgaggcaaaca
ttggtgtcggtaagcatgaattgtcccttgatagagcgtttgtttttcgaatcttcaaaa
acaggaagagatgacagcctgaaatcgccaacatgtgtggagctggtaaataattgtcca
aatttaacttcattggctcttagaggtttcaagctgtatgattataaacttcgcatactt
gttaagggatttcgcaagctaaaatatgttgatttttcaacatcatattctatcactgga
agttttttgaggaaccttggaggtaacataggtgggagtctgctggaagttatgattttg
cgagactgcatacatctcaaagagctggaagttgcacgattattaacatcagttcttgct
ggggactttaaatatcttcaacatcttgatatatcaaacagggaaggtttggctgctgca
ggtgactcgtatggtagatgttacagttcaagtatcattcctatgaagcaagtattagaa
gaaagacctgaaatctgtttgctagcagaatttccatcagaaggaagttttatcgacatc
agccaaatgactgatagcgatctaaatagcgaggtcagcttgtcatcattactgagcagt
attgcatcagatggttcgtcttttatgtacacatcggaaagcaactatagtagtgatcag
acaagtgggaatgaggagggtagagattctggttatgttgtttgtgaggaaagctcagat
gagtatgattatctgcttggctag
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