Populus nigra (Lombardy poplar): 133691771
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Entry
133691771 CDS
T10372
Name
(RefSeq) protein transport protein SEC23 C-like
KO
K14006
protein transport protein SEC23
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133691771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133691771
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133691771
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
133691771
NCBI-ProteinID:
XP_061968347
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Position
4:complement(23067850..23090188)
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AA seq
815 aa
AA seq
DB search
MAREEMGAVWPFVGQEIVVAVKMEMFVNFPNRFGINCATGEFVELEAQDGVRMPWNVLPG
TKQESSNCVVPVSVIYTPIKPFPNMPVLPYSPLRCRNCRSVLNRFCTVDFSAKLWICPFC
FQRNQFPLHYTAISDDNLPVELFSQYTTIEYEEPQMISSSSPSPMIFMFVVDTCMIEEEM
AFLKSALSQAIELLPDNSLVGLITFGTLVHVHELGFGETPKTYVFKGSKDVSKDQLLEQM
GFFLKKPKPPTSVIAGAKDGLSSDSISRFLLPASQCEFTLNSVLEELQKDPWPVPPHQRA
SRCTGTALSVAACLLGACVPGSGARIMAFIGGPSTEGLGSIVSKNLSEPIRSHKDIDKDS
ANHYHKAVKFYERLAKQLVHQGHVLNLFACALDQVGVAELKVAIERTGGLVVLAESFGHL
VFKDSLRRVLQLGDYDHGLSSNGIFEVNCSKDIRVQGIIGPCASLEKKGPLCSDTVVGQG
TTSAWKICGLDKATTLCLIFEIAKDSTDTTVQQPSSYQFYFQFLTYAYAFLSGYYQHSGG
HMRLRVTTLSRRWVAGLGSAQDLIAGFDQEAAAVAMARLVSFKMENEAEFDPIRWLDKAL
IHLCARFGDYQKGSSSSFSLSSRLSIFPQFMFHLRRSQFVQVFNNSPDETAYFRLILNRE
NVANSVVMIQPSLISYSFHSGPEPALLDVAAIAADRILLLDSYFTVVIFHGATIAQWRKA
GYHNQPEHQAFAQLLQAPRDDTDEIIKERFPVPRLVICDQHGSQARFLLAKLNPSASYNS
DSPLPGEDVLFTDDASFEVFLDYLQRLVVQRDHFY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggctagagaagagatgggggcagtgtggccttttgtgggtcaggagattgtagtggcg
gtgaagatggaaatgtttgtgaattttccgaatcgatttggaattaactgtgcgacgggg
gaatttgtggagctggaagctcaggacggcgtgagaatgccttggaacgtgttgccgggc
accaagcaagaatcaagcaactgtgtggtacctgtgtccgtcatttacactccgatcaag
cccttcccaaacatgcccgttctcccatattctccactgcgttgccgaaactgtcgctcc
gtcctcaatcgattctgcaccgtcgatttctctgccaagctttggatctgccccttctgc
tttcaacggaaccagtttccccttcactataccgccatctctgacgacaacctccctgtc
gagcttttctctcagtatacgaccatcgagtacgaggaacctcagatgatctcatcctcc
tctccatcaccgatgatattcatgttcgtggtggacacttgcatgatcgaggaggagatg
gccttcctcaagtctgccctgtcccaggccatcgaactcctccctgataactccttggtg
ggcctcattacctttggtactcttgtccacgttcacgaacttggctttggtgaaacccct
aagacctacgttttcaagggctccaaggacgtctccaaggaccagcttctcgagcagatg
ggcttctttctcaagaagcccaagccccccaccagtgtcattgccggcgccaaggatggc
ctctcttctgatagcatttcccgcttcctcttgcctgcctcccaatgcgaatttacactc
aactctgtcctggaggagctgcagaaagatccttggccggtcccaccccatcagcgggct
agcaggtgcaccggcactgcactcagtgtggctgcttgtctgttaggagcttgtgttcct
ggttctggtgctagaattatggctttcattggaggtccatccactgaaggacttggttct
attgtgtcaaagaatctctccgaaccaattcgttctcacaaggacatcgataaggactct
gctaatcattatcataaagctgtcaagttctacgagagacttgctaagcagcttgtacat
caaggtcatgtgctcaatctgtttgcttgtgccctagaccaggtgggggttgctgaactt
aaagttgcaattgaaagaactggtgggcttgtcgtgcttgcagaaagctttggccattta
gtctttaaggattctctgagacgcgttctccagttgggtgattatgatcatggactatca
tcaaatggtatctttgaggtaaactgctcgaaggatatcagagttcaaggcattattggt
ccttgtgcatcgcttgaaaagaaaggtcctttgtgctctgacacagttgtaggccaggga
actactagtgcatggaagatatgtggcctggacaaagctacaactttatgtctaatattt
gaaattgcaaaggacagcacagatactactgttcaacaaccctcaagctatcaattctac
ttccaatttctgacttatgcttatgcttttttgagtggttactatcagcatagtggtggt
catatgaggcttcgcgtaacaaccctctcaagaagatgggttgctggacttggaagtgct
caggacttgattgctggattcgaccaagaagcagctgctgtagctatggcacgcctagtg
tctttcaaaatggaaaatgaggctgagtttgaccccataagatggctagacaaagctttg
atacatctatgtgctcgatttggagactatcagaagggtagttcatcttctttcagccta
tcttcacggctttcaatatttcctcaatttatgtttcatttacgacgttctcagtttgtc
caggtcttcaacaacagcccagatgagacagcatacttcagacttatactgaatcgtgaa
aatgttgccaattcagttgtgatgatacagccttcattgatttcttattcgtttcattca
ggaccagaaccagcacttcttgatgttgctgccattgcagctgatagaattctgcttcta
gactcttatttcactgttgtcatttttcatggggcaacaattgctcaatggcggaaagct
ggatatcataatcaacctgaacatcaggcatttgcccagctgctgcaagctcctcgagat
gacacagatgaaataatcaaggaaaggtttccagttcctcgcttggtcatttgtgatcag
catggttcacaggcccgttttcttctggcaaaattgaacccttctgcttcatacaactcc
gattctcctcttcccggtgaagatgtcttgtttaccgatgacgcgagctttgaggtcttc
ttggattatcttcaaagactagtagttcaaagagaccatttttactag
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