Populus nigra (Lombardy poplar): 133691967
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Entry
133691967 CDS
T10372
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00240
Pyrimidine metabolism
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
133691967
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
133691967
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Motif
Pfam:
Indigoidine_A
Beta-AFase-like_GH127_cat
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
133691967
NCBI-ProteinID:
XP_061968586
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Position
1:complement(23476284..23481542)
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AA seq
341 aa
AA seq
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MESSSSALSRLSNLHRHLHPPQSNSKIQEGLLKLSPEVAEALSSGHPVVALESTIISHGM
PYPKNLKTAKEVEAIVRENGAVPATVAILDGVPCIGLSMGELERVATLGTKAQKTARRDI
AHVVANRGNGATTVSATMFFASMVGIHVFVTGGIGGVHRHGEQTMDISSDLTELGRTPVA
VISAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTERSGCKVHCRVDTPDDCARLI
DANLKLKLGSGILIAVPIPKEHSASGGLIESSIQIALREARDKNITGNAETPFLLAKVNE
LTGGASLASNIALVKNNALVGAKIAVALAQLKEHSNRGDAE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcgtcatcagctctgtcaagattatcgaatttacataggcaccttcaccct
ccacaatcaaactccaagattcaagaggggttgctgaagctatctccagaggttgctgaa
gctctttcatctgggcatcctgttgttgctttagaatccaccattatttctcatggtatg
ccttatcctaaaaacttgaaaacagcgaaggaggtggaggcaattgtgagggagaatgga
gcagttcctgccaccgttgccattttggatggtgtaccctgcataggtttgagtatggga
gagctagagagagttgctactcttggaactaaagcacaaaagactgctcggagagacatt
gcacatgttgtggctaacagagggaatggtgctactactgtttccgcaaccatgtttttt
gcttccatggttggtatccatgttttcgtaactgggggaattgggggagtacatagacat
ggtgaacaaacaatggatatatcttctgatcttacagagcttggcaggactccagttgca
gtaatctctgctggagtaaaatctatattagatattcccagaaccctagaatatttggag
actcagggcgtttgtgttgctgcttataagaccaatgagtttccggcatttttcacagag
agaagtggctgcaaggtacattgtcgtgttgacaccccagatgactgtgctcggctaata
gatgcaaacttgaaacttaagcttggatctggaattctaattgcagttccaatccccaag
gaacactcagcttctggaggcttaatcgagtcttctatacaaattgcccttagagaagct
agggacaagaatataactggcaatgctgaaactccattcttgcttgcaaaagtgaacgaa
ctcactggaggagcctcactggcatctaacattgctcttgtgaagaataatgcacttgtt
ggtgctaagattgcagtagcccttgctcagctaaaagaacattctaatagaggagatgct
gagtga
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