KEGG   Populus nigra (Lombardy poplar): 133691986
Entry
133691986         CDS       T10372                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pnz03036]
    133691986
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133691986
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133691986
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133691986
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Gbeta WDR55 Beta-prop_Aladin ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_DCAF12 eIF2A PROPPIN B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 133691986
NCBI-ProteinID: XP_061968606
LinkDB
Position
4:19520302..19527308
AA seq 347 aa
MDLDDDGNMILKEIQTLEGHADRVWSLAWNPATATSPVFASCSGDKTVRIWEQTPSTRLW
HCKAVLEETHTRTVRSCAWSPSGKLLATASFDATTSIWENISGDFECVSTLEGHENEVKS
VSWXASGSFLATCSRDKTVWIWEVMPGNEFECASVLQGHTQDVKMVKWHPTMDVLFSCSY
DNTVKVWAEDGTGDWHCVQTLGESNNGHSSTVWALSFNAEGDRMVTCSDDLTLKIWETDV
GRMVLGDGHAPWNHLCTLSGYHDRTIFSVHWSREGIIASGAADDGLRFFLENKDGLVDGP
SYKLLLKREKAHNMDINSVQWGPGETRLLASTSDDGKIKIWELATLT
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggatttggacgacgacggcaatatgatactgaaggagattcaaacacttgaaggacac
gccgatagggtttggagcttagcttggaatccagccacagcaacttctcctgtcttcgct
tcttgtagcggcgataagactgttcgaatctgggagcagactccttccactcgcctttgg
cactgcaaggcagttctggaagaaacacacactagaactgttcggtcgtgtgcctggtca
ccttctgggaaattgttggcaaccgccagctttgatgccaccacttccatttgggaaaat
attagcggtgattttgaatgtgtttctactttagagggtcatgaaaatgaagtgaaaagt
gtgtcttggnatgcatctggttcgttccttgcgacgtgtagtcgggataagactgtttgg
atttgggaagtgatgcctgggaatgaattcgagtgtgcttcggttttgcaaggacacaca
caagatgttaaaatggttaaatggcatccaactatggatgttttgttttcttgtagttat
gataatactgttaaggtttgggctgaggatggcactggtgattggcattgtgttcaaacc
ttaggtgaatctaacaatggtcactcttctactgtctgggcactttcttttaacgctgaa
ggagacagaatggttacttgtagtgatgatcttaccctaaaaatatgggaaacagatgtt
gggaggatggtgttgggtgatgggcacgctccttggaatcatctttgcactctctcaggt
tatcatgatcgaacgatcttttcagttcattggtcaagggaaggtattatagcaagcgga
gcagctgatgatggtctacggttttttctggagaacaaagatggtttggttgacggtcct
tcatataaactgttgctgaaaagggaaaaggctcacaatatggacataaactcagtgcaa
tggggccctggggaaacccggctacttgcttccacaagtgatgatgggaaaataaagata
tgggaactggcaactctaacctga

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