Populus nigra (Lombardy poplar): 133692008
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Entry
133692008 CDS
T10372
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133692008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133692008
Membrane trafficking [BR:
pnz04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
133692008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
133692008
NCBI-ProteinID:
XP_061968635
LinkDB
All DBs
Position
4:11169843..11179884
Genome browser
AA seq
1785 aa
AA seq
DB search
MASSEADSRLSQVVSPALEKIVKNSSWRKHSKLAHECKSVLEILTSRKPQQQPPPTSPSD
DSSSESSLPGPLHDGGSIEYSLAESESILSPLINACNTQFLKIVDPAVDCIQKLIAHGYL
RGEADSTGGTEAKLLAKLIESVCKCYDLGDDGVELLVLKTLLSAVTSISLRIHGDCLLQI
VRTCYDIYLGSKNVINQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMGPVEKTD
VDGSMAVFVQGFITKIMQDIDGVFNPGTPSKSSMTVAHDGAFETTTGTVESTNPADLLDS
TDKDMLDAKYWEISMYKTALEDRKGELADGEGEREREDDLEVQIGNKLRRDAFLVFRALC
KLSMKTPPKEALADPQLMRGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKN
SSSSLMIIFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRILENVVQPNFQQKIIVLRF
LDKLCVDSQILVDIFINYDCDINSSNIFERMVNGLLKTAQGALPGTATTLLPPQEVTMKL
EAMKSLVAILKSIGDWMNKQLRIPDPHSAKKPDAAENSPGPGSLPMTNGNGDEPVEGSDS
HSETSTEASDVSAIEQRRAYKLEFQEGISLFNRKPKKGIEFLINANKVGNSAEEIAAFLK
NASGLNKTLIGDYLGEREDFLLKVMHAYVDSFDFHGLEFDEAIRVFLQGFRLPGEAQKID
RIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSADDFIRNNRGID
DGKDLPEEYLRSLFERISKNEIKMKEYDLALQQKQSLNSNRVLGLDSILNIVIRKRGEEK
NMETSDDLIRHMQEQFKEKARKSESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDD
EVVIALCLEGIRYAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVTI
ADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNNSEKSKQSKSTILPVL
KKKGPGRMQHAAASVLRGSYDSAGIGGNAAGAVTSEQMNNLVSNLNMLEQVGNSEMNRIF
TRSQKLNSEAIIDFVKALCKVSVEELRSASDPRVFSLTKIVEIAHFNMNRIRLVWSSIWH
VLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLDREELVNYNFQNEFMKPFVIVMRKSNA
VEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYF
PYITETETTTFTDCVNCLIAFTNSRFSKDISLNAIAFLQFCATKLAEGDLGSSSRNKDKE
VSVKISSPSPRTRKDGKQENGEIKDKEDHLYFWFPLLAGLSELSFDPRPEVRKSALQVLF
ETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPPGGNSPEQGIDGDMGELDQDAWLY
GTCTLALQLVVDLFVKFYNTVNPLLRKVLSLLVSFIRRPHQSLAGIGIAAFVRLMSNAGD
MFSEEKWLEVVLSLKEAANATLPDFSYIVSGESSVIADEQNNGETAGSDMAEDESEGLVT
HRLYASISDAKCRAAVQLLLIQAVMEIYSMYRSHLSAKCALVLFDALHEVASHAHSINTN
TTLRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLLLDRPPPFDEAEVESCLVNLC
EEVLQFYVVTACSGQTSETSTSGQCLWLIPLGSGKRRELAARAPLIVATLQAICSLRASS
FEKKLPHFFPLLSSLISCEHGSNEVQVALSDMLSSSVGPFLLRSC
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcggaagccgattcccggttaagccaagtggtatcccctgctttagaaaaa
atcgtaaaaaactcatcgtggcgtaaacactcgaaattagcacacgaatgcaaatccgtc
ctcgagattctcacttctcgaaaaccccaacaacagcctcctccgacttccccgtccgac
gactcctcatccgaatcctctctccctggcccactccacgacggcgggtccatcgagtac
tccctcgccgaatctgaatctatcctcagccctctgatcaacgcgtgcaacactcaattc
ctcaagatcgtcgatccagccgttgattgcatccagaaattgatcgcgcatgggtaccta
cgtggcgaggcggactccaccggaggtactgaagcgaaattgttagctaagttgattgaa
tctgtgtgtaaatgttatgatttaggggatgatggtgttgaattgctggttttgaaaacc
ctattatcagccgttacgtcgatttcgttgagaattcatggagattgtttgttgcaaata
gtgagaacttgttatgacatttatttagggagtaaaaatgtaattaatcaaacgacggcg
aaagcgtctttgattcaaatgttagttattgtgtttaggagaatggaggctgattcttca
acggttccggttcagccgattgttgtggctgaattaatgggaccagtggagaaaacggat
gtggatggatcaatggcggtgtttgttcaaggttttataacgaaaattatgcaggatata
gatggggtttttaatccggggacacccagtaagtcttcgatgacagtggcacatgatggg
gctttcgagaccactactggtacggtggagagtacaaatccggcagatttgcttgattcg
acggataaggatatgttagatgccaaatattgggaaattagtatgtataagacggctttg
gaagacaggaaaggggagttggctgacggggaaggggagagggagagggaggatgatttg
gaagtgcagattgggaataagttgaggagagatgcatttttggtgtttcgagcactatgt
aagttatctatgaaaactccgcccaaagaagcattggcggatccacagttgatgagaggg
aagattgttgcattggagttattgaagattttgttggagaatgctggtgctgtgtttagg
actagtgacaggttcttaggtgccatcaagcaatatctatgtctttcactgttgaagaac
agctcgtcaagtcttatgatcattttccagctttcttgctccattttcattagtttggtt
tcaaggttcagagctggactgaaagcagaaattggagtattttttcctatgattgttctc
aggattcttgaaaatgttgttcaacctaattttcagcagaagattatagtacttcggttt
ctagataagctctgtgttgattcccagatcttggtagacatttttattaattatgactgt
gatatcaactcatcaaacatatttgagagaatggtcaatggacttcttaaaactgctcaa
ggtgccctgcctggtactgccactacactgctgccacctcaggaggtgaccatgaaactt
gaagctatgaagtccttagtggctattctgaaatcaataggagactggatgaataaacaa
ttgcgcattcccgatcctcattctgccaagaaacctgatgcagccgaaaacagtcctgga
cctggaagtcttcccatgacaaatggtaatggggatgagcctgttgaaggatcagattct
cattctgaaacctcaactgaagcatcggatgtttcagctattgagcaacgacgggcttac
aagctggaatttcaggaaggtatatctcttttcaatcggaagcctaagaaaggaattgaa
tttctaatcaatgcaaataaagtggggaattcagcagaagagatagcagcctttcttaaa
aacgcatctggcttgaacaagactctgattggtgattaccttggggaaagagaagatttt
ttactgaaagtaatgcatgcttatgtagattcttttgactttcacggcctagagttcgat
gaggctatcagagtctttctacagggctttaggttaccaggtgaggcacaaaagattgat
cgaattatggagaagtttgctgaacgttactgcaaatgtaacccaaaggtttttagcagt
gctgacacagcctatgtccttgcttactctgtgatactgctcaacactgatgctcataat
cccatggtgaagaataagatgtcagctgatgacttcataagaaacaaccgtggcattgat
gatgggaaagatctacctgaggagtacttgagatctttgtttgaacgaatatcaaaaaat
gagatcaaaatgaaagaatatgatttagctctccaacaaaagcagtctttgaattcaaac
agagttttaggcttggatagtatcctgaacattgtgatccgcaagcggggtgaagaaaag
aatatggaaacaagtgatgatcttatcaggcacatgcaggaacaatttaaagaaaaagct
cgaaaatctgagtcagtttattatgctgcaacagatgtggtgattcttagattcatgatt
gaggtatgctgggctcctatgctggcagccttcagtgtgcctcttgaccaaagcgatgat
gaagtggtgatagctttgtgtcttgaaggtatccgctatgcaatccatgttactgctgtg
atgtccatgaagactcatagagatgcttttgtgacttcattagcaaagtttacatcgctc
cactccccagctgatatcaagcagaaaaatattgatgctatcaaggcaatagttacaatt
gcagatgaagatgggaattatttgcaagaagcttgggaacatattttgacatgtgtctca
cgctttgaacatttgcatctcctgggagagggtgctcctccagatgccacctttttcgct
tttccccaaaataactctgaaaagtcaaaacaaagcaagtcaaccatcctccctgttctg
aaaaagaagggacccgggaggatgcagcatgcagctgctagtgtgctgagaggttcatat
gatagtgctggtattggtggaaatgctgctggggctgtcacaagtgagcagatgaacaat
ttagtttccaacttaaacatgttagagcaagttggcaactctgagatgaaccgcatcttc
acacggagccaaaagttaaacagtgaggcaataattgactttgtgaaggctctttgcaag
gtttctgtggaggaattgagatcagcttctgatccacgggtctttagccttacaaagatt
gttgagattgcgcactttaacatgaatcgcatcaggcttgtatggtcaagcatctggcat
gtgctttctgatttctttgtaaccattggctgttctgaaaacctttccattgcaattttt
gcaatggactctttacgccaattatcaatgaagttcttagaccgagaagagttggtaaac
tataattttcagaatgagtttatgaagccgtttgttattgttatgcggaagagtaatgct
gttgaaatcagagaattgattatcagatgtgtctcgcaaatggtcctgtctcgtgtcaat
aatgttaaatctggatggaagagcatgttcatggttttcacaacagcagcttatgatgac
cacaaaaacattgttctcttggcctttgaaataattgaaaagattattagagattacttc
ccatacattacggagactgaaacaaccacctttactgattgtgtgaattgcctgatagca
ttcaccaatagtagattcagcaaagacattagccttaatgcaattgcttttcttcaattc
tgtgccacaaaacttgctgaaggagatcttggatcttcatcaaggaacaaagacaaggaa
gtctcagtaaaaatttcatccccttcacctcggaccagaaaagatggaaaacaagagaat
ggagaaatcaaagacaaggaagatcatctttatttctggttccctctgttggctggttta
tcagaacttagctttgaccctaggcctgaagtcaggaagagtgccttgcaagttctgttt
gaaactttacgcaatcatggtcatcttttttctctacctttatgggaaagagtctttgag
tcggtcttatttcctatatttgactatgtgcggcatgctattgatcctcctggaggcaac
tcccctgagcaggggattgatggtgatatgggtgaacttgatcaagatgcatggctctat
gggacatgtaccttggctctccaactggttgtagatctttttgtgaaattctacaatact
gtcaatccgcttttaagaaaggtgctatcgcttctggttagcttcattaggcgtcctcac
caaagtcttgctggtattggtattgcggcctttgtgcgtttgatgagcaatgctggagat
atgttttcagaggagaagtggctggaagtggttttgtcattgaaagaggctgccaatgca
acactccctgatttctcttacattgtaagtggagaatcatcggtaatagctgatgaacaa
aataatggagagactgctggatctgacatggctgaagatgaatcagagggactggtgaca
caccgtctttatgcttctatatctgatgcaaagtgtcgagctgctgttcaacttctgttg
attcaggcggtgatggagatctatagcatgtaccggtctcatctttcagcaaaatgtgcc
ttggtgctctttgatgctttgcatgaggtggcatcccatgctcacagtatcaacacaaat
acaacattacgttcaaaactacaagagtttggctctatgacccaaatgcaagaccctcca
ctattacgcctggagaatgagtcctatcaaatttgcctcacattcttacaaaatcttttg
ctggacagacctccaccttttgatgaagctgaagtggaatcctgccttgtcaacctctgt
gaagaggttttacagttttacgttgtaactgcctgttctggacagacatcagaaacttct
accagtggacaatgcctgtggctgattcctttaggttctggaaaacgaagggaattggct
gcacgtgcacctcttattgttgcaactctccaggccatctgtagtttgagagcctcttcg
tttgagaagaaattgcctcatttcttccctcttctttcgagtttgataagttgtgagcat
gggtcaaatgaggtccaggtagctctcagtgacatgctcagctcatcagtgggtcctttt
ttgcttcggtcttgttga
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