Populus nigra (Lombardy poplar): 133692014
Help
Entry
133692014 CDS
T10372
Name
(RefSeq) mechanosensitive ion channel protein 1, mitochondrial-like isoform X1
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133692014
Transporters [BR:
pnz02000
]
Other transporters
Pores ion channels [TC:
1
]
133692014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
Msl2-3_C
MS_channel_1st
Motif
Other DBs
NCBI-GeneID:
133692014
NCBI-ProteinID:
XP_061968645
LinkDB
All DBs
Position
4:12223246..12228052
Genome browser
AA seq
534 aa
AA seq
DB search
MAGLRLSMLKNSLCISINSLSWQSLQFCNVHGSTLRSAYAIINRGYYKDESRLAGNLTNF
KVVRSGTCVNSQSYRIEPVRGFSSTSSNVLFQSAVPFISMRPELSYRSFSWSSGGKVDKP
VGNEVPASSGGNDVDVSNSGAIVSDWINKVKEAWQSTVDAVTYSGQKAIETSDELTPYAQ
QLLDSHPYLKNVVVPVGSTLTGTVVAWVVMPRLLRRFHKYSLQTPAALLSGGISGEQIPY
EKSILGALEDPLRYVITFMAFSQIAVMVAPTTIASQYIAQVWRGAAILSFVWFLHRWKTN
VFNRVIASATVDQEKLLTLDRVSSVGLFVIGLMALAEACGVAVQSFLTVGGIGGVATAFA
AKDVLGNVLSGLSMQFSKPFSLGDTIKAGSIEGQVVEMGLTTTSLLNVEQFPVLVPNSLF
SSQVIVNKSRAQWRAVVSKIPVIVDDVEKIPQISNDIKSMLNSNPNVFLGKEAPYCYLSR
IESSFAELTLGCNLKQMSKDELYTTEEDILLQSVRIIKERGVKLSSTWQDSTGQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctggacttaggctttcaatgctaaaaaattcgctctgtatttccattaactccctt
tcatggcaatcacttcaattttgtaatgttcatggaagtactctaagatcagcatatgct
atcataaatcgtggttattacaaagatgaatcaagattggctggaaatctgacaaatttt
aaagttgtgagatctggcacttgtgtcaatagccaatcttataggattgaacccgtgaga
ggattttcgtcaacttcatcgaatgtgttgtttcaaagtgccgttcctttcatttcaatg
agacccgagctgagctatcgatcattctcttggtcatctggtggcaaagttgataaacct
gtcggtaatgaagttccagcttcatccggtggaaatgatgtggatgttagtaacagtggt
gctattgtaagtgactggattaataaggttaaagaagcttggcaaagtacagtggatgca
gtaacttattctggccaaaaggctatagagacatccgatgaactgaccccatatgctcag
cagttgcttgattcacatccgtatcttaaaaatgttgttgttccagttggttcgactttg
actggtaccgtagtggcttgggtggtgatgcctagacttttgaggcgatttcacaagtat
tcattgcaaactcctgctgctttgctatctggaggcatatctggggagcaaattccatat
gagaaaagcatattgggtgctttggaagatcctttgagatatgtaatcaccttcatggca
ttttcgcaaattgctgtgatggtggcacctactacgattgcttctcaatatatagcacaa
gtatggaggggtgctgctattctttcttttgtatggtttctgcatcggtggaagacaaat
gtgtttaatcgtgtgatagcttcagcaacggtagatcaggaaaagctgttaactcttgat
agagtttcttctgttggtctttttgttattggactgatggctttagctgaggcttgtggg
gtagcagtgcaatcttttctgactgtgggtggcattggaggagttgctactgcttttgct
gccaaagatgtccttgggaatgttctcagtgggttgtctatgcaattttcaaagcccttt
tcacttggagatacaataaaggctgggtctatagaaggtcaagtggttgaaatgggactt
acaaccacttccttactgaatgttgagcaattccctgtcctcgttccaaattcattgttt
tccagtcaggtaattgtgaacaagtctcgtgcccaatggcgtgcagttgtctccaaaatt
cctgtgatagttgatgacgtggagaagataccccagatatcaaatgacatcaagagcatg
ctaaattcaaacccaaacgttttcttgggaaaggaggctccttactgttacttatctaga
atagaaagttcatttgccgaactgactcttggttgcaatctcaagcaaatgagcaaagat
gaattatacactacggaggaagacattcttctgcagtcagtcaggataataaaggagcgt
ggtgttaaattaagcagcacatggcaggacagtaccggtcagtga
DBGET
integrated database retrieval system
