Populus nigra (Lombardy poplar): 133692030
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Entry
133692030 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133692030
KO
K23325
transducin beta-like protein 2
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133692030
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133692030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Ge1_WD40
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
NBCH_WD40
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
133692030
NCBI-ProteinID:
XP_061968674
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Position
4:11090021..11095310
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AA seq
438 aa
AA seq
DB search
MDQVLPIALISLLLGTAIALIFFKHYFLKRKSEIGSISEPGLHPDLHKKPPKPNHQSRKP
HSKPHSHASSDKDHNKKHHPLDLNTLKGHGDSVSGLCFSYDGRSLATACADGVVRVFKLD
DASSKSFKFLRINVPAGGHPVAVAFSDDASSVVVASQTLSGSSLYMWGEEKVKATDDSKQ
QPKLPLPDIKWEHHKIHEKRAVLTLVGTASTYGSGDGSTIVASCSEGTDIKIWHGKTGKV
LGNVDTNQLKNNMATISPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVPKAMQLKGHKSA
VTWLCFTPDSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLLDSNGATLHYDRL
SLSPDGRILAATHGSMLQWLCVETGKVLDTADNAHNGDITWIAWAPKPMPAGDGQTFVLA
TASVDKKVKLWAAPPLKI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggtcctcccgattgcactcatctcactccttctcggtactgcaatcgctctt
attttcttcaagcactacttcctcaaaagaaaatccgagattggatccatctccgaaccc
ggacttcatccggatcttcataaaaaacctcctaaacctaatcaccaatccagaaaacct
cactccaaacctcactcgcatgcctcctccgataaggatcataataagaaacatcatcca
ttggatttgaacactttgaaaggtcacggtgattctgttagcggcctgtgtttctcgtat
gatgggcgcagtttggctaccgcttgtgcagatggagtggtgagggtgtttaaattggat
gatgcttcgagtaaaagtttcaagtttttgagaattaatgtgccagctggaggtcatccg
gtagcagtagcgttttctgatgatgcatcatctgtggtagtagcgtcgcaaacactgtct
ggttcgtctttatatatgtggggagaggaaaaggtaaaagctactgatgactctaagcag
caaccaaagcttccgttgcctgatatcaaatgggaacatcacaaaattcatgagaaacgg
gctgttttgaccctggttggaaccgcttctacttatggaagtggtgatggaagtacaatt
gtggcctcttgttcggaaggtactgatatcaaaatttggcatggaaagacaggaaaggtt
ttggggaatgtcgatacaaatcaattgaaaaacaacatggctactatatccccaaatggg
cgtttcattgctgctgcagcttttactgcagatgtgaaggtatgggagattgtatattca
aaagatggttctgtcaaggaggttccaaaagccatgcaacttaaagggcacaaaagtgca
gtaacatggttatgcttcactccagactcagagcaaatcatcacagcctccaaagatggt
tcgataagaatttggaacatcaatgttcgttatcatcttgatgaggatccaaagacttta
aaggtgtttccgattccacttcttgattcaaatggtgcaactctgcattatgatcgtctc
agtttatcccctgatggaaggatattggctgcaacacatggttcgatgttgcagtggtta
tgtgttgaaactggaaaggttttggacacggctgacaatgcccataatggtgacatcaca
tggattgcatgggcgcctaaacctatgccagcaggtgatggacagaccttcgttttggcc
acggccagcgtggacaagaaagtgaagttatgggcagctccaccgcttaagatatga
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