Populus nigra (Lombardy poplar): 133692043
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Entry
133692043 CDS
T10372
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133692043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133692043
Spliceosome [BR:
pnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133692043
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GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
133692043
NCBI-ProteinID:
XP_061968696
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All DBs
Position
4:13470331..13474659
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AA seq
486 aa
AA seq
DB search
MATLADSFLADLDELSDNDADIVDEDDDVEAGNMEEDVDGDLADIEALNYDDLDSVSKLQ
KTQRFNDIMQKVEDALQKGSDVQDHGMVLEDDPEYQLIVNCNALSVDIENEIVIIHNFIR
DKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDMEGLIPAAIRMVISVTASTTSGK
PLPEEVLQKTIDACNRALALDSAKKKVLDFVETRMGYIAPNLSAIVGSAVAAKLMGMAGG
LTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTPPSLRMRAGRLLAA
KSTLAARVDSTRGDPSGNTGRTLREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR
RLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSIGQSKLA
AKVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSENGTF
SKIKRA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactagctgattctttccttgctgaccttgatgagttatccgacaacgatgct
gatattgtcgatgaagatgatgatgtagaggcaggaaacatggaagaggatgtcgatgga
gacttggcggacattgaagctcttaactatgatgatttggacagtgtgtcaaaattgcag
aaaacacaacgatttaatgatataatgcagaaagtggaagatgcacttcagaagggctca
gatgtccaagatcatggaatggtattggaagatgatcctgaatatcagctaatagtgaac
tgcaatgcattgtcagttgacattgagaatgaaattgttatcatccacaattttattcgt
gacaagtaccggctgaaatttccagagcttgaatcacttgtccatcacccaattgattat
gctcgtgttgtgaagaagattggaaacgagatggatttgacccttgttgatatggaaggg
cttatacctgccgctatcagaatggtgatttctgtgacagcatccacaacaagtggcaaa
ccgcttcctgaagaagtccttcaaaagacaattgacgcttgtaatcgagctcttgcactt
gattcagcaaagaagaaggtccttgattttgtagaaacaagaatgggttacattgcacca
aatctttctgctattgttggtagtgctgttgctgcaaaacttatggggatggctggtggt
ctcacagccttagccaagatgcctgcctgcaatgttcagcttcttggtgccaagaagaag
aaccttgcaggattttctactgcaacatcccaattccgtgttggttatatagagcaaaca
gaggtgtttcagtccacaccaccttctttgagaatgcgtgctggtcgactattggccgca
aaatcaacacttgctgcacgagtagattctactagaggagatccatcaggaaacactgga
agaaccctgagggaagagattcacaagaaaatagagaagtggcaagagcctcctcctgca
aagcaacctaaaccacttccagttcctgattctgaacctaagaaaaagagaggtgggcgg
cgcctaaggaagatgaaagaaagatatgctataacagacatgaggaagcttgccaatagg
atgcaatttggggtacctgaagagagttctttgggtgatgggctgggggaaggttatggt
atgcttggtcaggctgggaatggcaagctgcgtgtatcaattggtcagagcaaactcgca
gcgaaagttgctaagaagttcaaggagaagaattatggaagcagtggtgctacttctggc
ctcacctcaagtctggcatttactcctgttcaggggattgagctcacaaatccacaagct
catgcgcaccaacttggcagtgggacacaaagcacctatttttctgagaatggaaccttt
tcaaagatcaagagggcctga
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