KEGG   Populus nigra (Lombardy poplar): 133692051
Entry
133692051         CDS       T10372                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03083  Polycomb repressive complex
pnz04120  Ubiquitin mediated proteolysis
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133692051
   04120 Ubiquitin mediated proteolysis
    133692051
  09126 Chromosome
   03083 Polycomb repressive complex
    133692051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133692051
   04121 Ubiquitin system [BR:pnz04121]
    133692051
   03036 Chromosome and associated proteins [BR:pnz03036]
    133692051
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133692051
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133692051
   Cul7 complex
     133692051
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133692051
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133692051
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 133692051
NCBI-ProteinID: XP_061968705
LinkDB
Position
4:complement(1125444..1126563)
AA seq 157 aa
MSSSRKFTLKSSDGEAFEVDEAVALESQTIRHMIEEDCADNAIPLPNVTSKILSKVIEYC
KKHVETPKSDDRPSSADDDLKSWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVAD
MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcgtcgagcaggaaatttactctgaaaagctcagacggagaggcttttgaggtagac
gaagctgtagcgcttgaatcgcagactataagacacatgatcgaagaagattgcgctgat
aacgctattcctttgcctaacgtcacaagcaagattctttctaaggtgatcgagtactgc
aaaaagcacgttgagactcctaaatcggacgatcgcccttcttccgctgatgatgatctt
aaatcttgggatgctgagttcgtcaaagttgatcaggccactctctttgatctcatcctg
gctgccaattacttgaacatcaagaacttgctggacctaacttgtcagacagtggctgat
atgatcaagggcaagactccagaagagatccgtaagacattcaacatcaagaatgacttt
acaccagaggaagaggaggaggttcggagagagaaccagtgggcttttgagtag

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