Populus nigra (Lombardy poplar): 133692138
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Entry
133692138 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133692138
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133692138
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
133692138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_5
RING_XB3-XBAT31
zf-RING_6
zf-rbx1
Prok-RING_4
TRAF3_RING
zf-RING_4
zf-C3HC4_4
zf-ANAPC11
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
133692138
NCBI-ProteinID:
XP_061968841
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All DBs
Position
4:complement(10570910..10583682)
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AA seq
879 aa
AA seq
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MGSTGEPDRKRRHFSSISSPPAAMAKKQPFSHLSEDKKLDTTVLQYQNQKLQQKLEAQKV
EHSALGNKFSQLKEKQQPYNSTLNAVNKSWEVLVSDLETCSNRTRERSNGQDVKHIPVTK
DESSSFLKDAFLSRLMETGATESSSSNNCPDQMEVDIETGFEKNKNVVHNIVDTINGLWH
LKDGLHAAVLKQLPEDDACRQMTSNELEMELKNLRSGLSDLHLKHKSLAMELQNHRDADA
KNKAKLKHLKGELEIAVAELKDSNCKLATLKAERDATKGAFFPVLNLGSKHIGGDKVRDK
QKDLQEMESAVKELLDQASSRLQELKDLHEERLKILQKLSNLQNLLKNVKSISSSQAYLL
VRDQLEKSKSEVLQYRALIEKLQVEKDNLVWKERELNVKNDLVDVCRRSTAVVDSRIAVL
GKEIQKQINERNMIETKLEEASREPGRKEIIAEFKALVSSFPEEMGSMQRQLSNSKDASS
DIHSLRADGQSLSTVLDRKAKECENLSARSTNQNTEIHKLQSVVQDLKESELELKLILDM
YRGESTYSRDVLEARDLEYKARAQVQSFKSSLDEHNLESRVKTANEAEARSQQRLAAAEA
DIADLRQKLEASKRDMSRLSDVLKSKNEGNEAYLSEIETIGQAYDDMQTQNQHLLQQITE
RDDYNIKLVLEGVRARQMHGSLLMDKQIMEKEIQQANISLNLFYVKAARIEDQSKFCSDQ
VHKLVEDKIQRSVTLENTQKKLLDMGRSSSQARESLEDSQSRVERSRSALLELRIDLEKE
RFDKRRMEEELEVARRKVSRLQAQTEGSSIVEKLQQELQEYREIVKCSICLDRPKEVVIT
KCYHLFCNTCVQRILESRHRKCPVCSMSFGHNDVRLVYI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggggagtacaggggagccagacagaaaacggcgtcactttagctctatatcatctcca
cctgctgctatggctaaaaagcagccgttctcgcatttatccgaggacaaaaagcttgat
accactgttcttcaataccaaaatcaaaagcttcaacagaagttggaggctcagaaggtt
gagcattctgcactaggaaacaaattctctcaactgaaggagaaacagcaaccatacaat
tccacattaaacgctgtcaacaagtcttgggaagtgttggttagtgacttggaaacgtgt
tccaaccgcacaagagagcggagcaatgggcaagatgtcaaacatataccagttacaaaa
gatgagagctcatcttttctcaaggatgcattccttagccgacttatggaaactggtgca
actgaaagttcctcttcaaataattgccctgatcagatggaagtggatatagaaactggc
tttgaaaagaataaaaacgttgtacataatatagtggatacaatcaatggcctttggcat
ctgaaggatggattacatgcagcagttttgaaacagcttccagaagatgatgcatgtagg
caaatgacatctaatgaactggagatggaacttaagaatttgaggtctgggctaagtgac
cttcatttgaagcacaaatcactggcaatggaattgcagaaccatcgagacgctgatgca
aaaaataaagcaaagcttaagcatctaaaaggtgaattggagattgcagttgcagaactg
aaagacagcaactgtaaattggcaacccttaaagcagagagagatgcaacaaaaggggca
ttctttccagtcttaaacttgggaagtaagcacattggtggtgataaggttagggataaa
caaaaggatctgcaagaaatggagtctgctgtcaaagagcttttagaccaagcttcttct
cgactacaagaactaaaagatcttcatgaagaaaggttaaaaatattacagaagctatcc
aatttgcagaacttgttgaagaatgtgaagagtatatcttcatcacaagcctacctcttg
gtgagagatcaactagagaaatcaaaatcagaagttctccaatatcgggccttaattgag
aaacttcaggttgagaaggataaccttgtctggaaggaaagagaattaaatgtgaaaaat
gacttggttgatgtttgtcgaagatctactgcagttgtggattctagaattgctgtttta
gggaaagaaatacaaaaacagattaatgaaagaaacatgattgagaccaagttggaagag
gcatctagagagcctggaagaaaagaaatcatagctgaattcaaagccttggtttcctca
tttcctgaggaaatgggctctatgcaacgccaattaagtaactccaaagatgcttcttct
gatattcattctttgcgagctgatgggcagtctctttctactgttctggataggaaggcc
aaagagtgtgaaaatttgtctgccagatccacaaaccaaaacaccgagatacataagttg
cagtctgtggtccaagatctgaaggaaagtgaactggagttgaaactgattttggacatg
tatcggggtgaatccacttattcaagggatgtcttagaagctagggatctcgaatacaag
gcaagggctcaagttcaaagttttaaatcctctcttgatgagcataatttggaatcacga
gtgaagacagcaaacgaagctgaggccagatcacagcaaaggctagctgctgcggaagct
gatattgctgatttgagacagaaattagaagcttctaaaagggatatgtctagactttct
gatgtcctgaaatcaaaaaatgaaggaaacgaggcctacttatctgaaatagagacaatt
ggtcaagcatatgatgacatgcaaactcaaaatcaacatctgttgcagcaaatcacagag
agagatgactataacattaagcttgttttagagggtgtgagagcaagacaaatgcatggt
tctctgctcatggacaaacaaatcatggaaaaggagattcagcaagccaatatttccctc
aatttattttatgtgaaagctgcaagaatagaagatcagtcaaaattctgctcagaccag
gttcataaacttgtggaagataagattcaaaggtcagttactttggaaaatacacaaaag
aaattgctggatatgggaagatcatctagtcaagcaagagagtcattggaggattcacaa
tctagagttgaaagaagtcgatctgcactgctggagctgcggatagatctggagaaagag
aggtttgacaagaggagaatggaagaggagttggaagttgcaaggagaaaggtttctcgt
cttcaagcacagacagaggggtcttctattgtagaaaaacttcagcaggagcttcaagaa
tacagggaaatagttaagtgcagtatctgtcttgacagacctaaagaggttgtcataaca
aaatgctaccatttgttctgcaacacttgtgtacagagaattctggaaagccgtcaccgc
aagtgtccagtatgtagcatgagttttgggcataatgacgtgaggcttgtttatatctga
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