Populus nigra (Lombardy poplar): 133692172
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Entry
133692172 CDS
T10372
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133692172
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133692172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133692172
NCBI-ProteinID:
XP_061968893
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Position
4:20565100..20572233
Genome browser
AA seq
1305 aa
AA seq
DB search
MFSPGIKRSSNRKAAAAPDNNSIPNRPATGTPAPWAPRLSVLARTQLTKKSEEKASDADP
IKPVYVGEFPEVVRDEQANFLRSHIPGGASISGGMDKETCLSWIICRNRLFIWSHLSSSP
SKDCVVLQLPLDCLDDGAHSNSGYHGTNWLLCFLNWDPTSRGRNKAVQCCKSAGVVLCNQ
KTRAVTYWPDIYNEGRSVPVTCMLSSDESEVTSFSVDGKSTPNRRSAINTMGSNSFNSLI
ACARPASQHVSVALACSSNGELWRFYCTPTEIQCSKVYQDTLYLSSHGSDGSQFVRSKGY
PRSLIWRFSPHSMDDSERQFFLLTDHEIQCFSIKLHPDSNVSKMWSHEIVGTDSDLGIKK
DLAGQKRIWPLDVQVDDHGKVITVLVATFCKDRVSSSSYTQYSLLTMQYKSGVNISSDVH
ERVLEKKAPIQVIIPKARVEDEDFLFSMRLRIGGKPSGSTLIISGDGTATVSHYFRNSTR
LYQFDLPYDAGNVLDASALPSTNDGEDGAWIVLTEKAGIWAIPEKAVVLGGVEPPERSLS
RKGSSNEGSTLEERRNLTFAGNVAPRRVSSEAGDSGDRKKAVMNRISRRTSHDEESEALL
GQLFHDFLLTGQVDASYEKLQSSGAFERDGETNVFTRTSKSIIDTLAKHWTTTRGAEILA
MTMVSNQLMDKQEKHQRFLQFLALSKCHEELCTKQRQSLLTIMEHGEKLSGMIQLRELQN
TISQNRSNMSGSPHSSSEAQPSGALWDLIQLVGERARRNTVLLMDRDNAEVFYSKVSDLE
EVFYCLHSYLTYLINEEQPHEAQIKRACELSNAVVSIVRSAMLYRNEHHMWYPLSQGLTS
WYCQPVVRNGLWRIASFMLQLLDGTSELELSAKSDLCAHLEVLAEVLLEAYAGAVTAKVE
RGGEHKGLLDEYWNRRDSLLNSLYKQVKYFVEGGHQVLNVRTDEPDEEILRKLTSNLLSI
SKRHEGYNTMWSICCDINDSALLRNLMHESMGPKGGFSYFVFKQLYEKRQISKLLRLGEE
FQEELSIFLKHHRNLLWLHELFLHQFSSASETLHVLALSQDETSISEAEETTDHVQNRFI
TTLADRKRLLNLSKIAIMAAGKNTDSETKMKRIEADLKILKLQEEILKVLPANEANQYDG
QRLFRPEELIELCLKVQNPELALRGFDVFAWTSSSFRRSHRNLLEECWKNAADQDDWGQL
HQASKDEGWSDEEILQQLRDTVLFQASSSCYGPNAEIIDEGFDAVLPLRKENSEVSALED
LDFSVEAILMQHKDYPDAGKLMLTAIMLGSVHDNSKVEENPSSME
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccaggaattaaaagatccagcaatcgaaaagcagcagcagcacctgacaat
aattcaatccctaatcgccctgccaccggcactcccgctccttgggctcctcgcctctca
gttctcgccagaactcaattgacgaaaaaaagtgaagaaaaagctagtgatgctgatcca
attaagcccgtgtatgttggagagtttccggaagtagttcgtgatgaacaagccaacttt
ctgcgcagccacattcctggtggtgcatctatatctggtggaatggataaggagacgtgc
ctttcctggatcatttgcagaaatagactctttatctggagtcacttatcatcttcacct
tcaaaagattgtgttgttcttcaacttcctttagattgtttagatgatggagctcatagc
aatagcggctatcacggcacaaattggctgctttgttttctcaactgggatcccacatcc
aggggaaggaataaagctgtacaatgttgcaagtctgctggtgtggtattgtgtaaccaa
aaaactcgagctgttacatactggcctgacatttacaatgaaggcagatctgttccagtt
acttgtatgttgtcttctgatgaatcggaggtgacttcattctctgttgatgggaagagc
acccctaatcggcggtctgcaattaatacaatgggatccaattcttttaactctttgatt
gcttgtgcacgtcctgctagccagcatgtttctgttgccttggcttgtagttccaatggt
gagctgtggcgcttttattgcacccccactgaaattcaatgcagtaaagtgtatcaggac
acattgtatttatcctcccatggcagtgatggtagtcaatttgtcaggagcaagggctat
ccaaggtcactcatctggcggttttcaccccattccatggacgattctgaacggcagttt
tttttattgactgatcatgagatacagtgtttcagtataaaacttcatcctgattcaaat
gtgtcaaagatgtggtctcatgaaattgttggcactgacagtgatttgggcattaaaaag
gatctggctggtcagaaacgcatatggcctctagatgtacaggtggatgaccatggcaaa
gtcatcacagttcttgttgccactttctgcaaggatcgtgtaagcagttccagctacaca
caatattctcttctgaccatgcaatataagtcaggagtcaacatttcttctgatgtacat
gaaagggttttggagaaaaaagccccaatccaagtgataatcccaaaagcaagagtagaa
gatgaagatttcttattttctatgagacttagaataggaggcaagccttcaggctcaaca
ctaataatttctggcgatggaacagcaacagtctcccattattttaggaactctacgcgt
ctctatcagtttgatctaccttatgatgcaggaaatgttctagatgcttcagcccttcct
tctacaaatgacggtgaagatggtgcatggattgtattaactgagaaggctggaatatgg
gcaataccagaaaaggctgttgtgcttggtggagttgaaccacctgagagaagcttgtcg
cgtaaagggagctcaaatgaagggtctacactagaagagagaagaaacctcacgtttgca
ggcaatgttgctcctagaagggtaagttctgaagcaggggattctggtgatagaaaaaag
gctgttatgaataggatttcacgccgaacttcgcacgatgaagaatcagaggctttactt
ggtcagcttttccatgattttctgttaactgggcaagtcgatgcctcatatgaaaagctt
caaagttctggggcttttgaaagggatggagaaacaaatgttttcacccgcacaagcaaa
tcgatcattgacaccttagctaaacactggacaaccaccagaggtgctgaaattttggct
atgaccatggtatctaaccaactcatggataagcaggaaaagcatcaacgatttttacag
tttcttgctctatcaaaatgccatgaggagctatgcactaaacagagacagtctttgcta
acaatcatggaacatggtgaaaagctttctggaatgattcaactgagagaactgcaaaac
acaattagccagaacaggtcaaatatgagcggctccccacattccagttcagaagctcaa
ccttcaggtgctctatgggatctaattcagttagttggtgaaagagcccgccgcaataca
gttcttctcatggacagagacaatgctgaagtgttttacagtaaggtttcggatcttgaa
gaagtattttattgcttgcacagctacttaacatacctaataaatgaagaacagcctcat
gaggctcagatcaagagggcttgtgaactctcaaatgcagttgtgtctatagttcgttct
gctatgctctatagaaatgagcaccatatgtggtatccactatcccagggcttaacatct
tggtattgtcaacctgttgtgcggaatgggctgtggagaattgcttctttcatgcttcag
ctgttagatggaacatctgaactcgaactttctgcaaaatcagatttatgtgctcatcta
gaagtactggctgaagttctacttgaggcatatgctggtgctgtcacagctaaagttgag
cgaggaggagaacacaaggggctgctagatgagtattggaatagacgggattcccttctt
aactccctctacaaacaagtgaaatattttgtggaaggcgggcaccaggttttaaatgta
agaactgatgagccagatgaggaaatccttagaaagctaacttcaaatttgttgtccatt
tcaaaaagacatgaagggtacaatactatgtggagtatatgttgtgacatcaacgattca
gcgctgctcagaaatcttatgcacgagagcatgggaccaaagggaggtttcagttatttc
gtgtttaaacaactgtatgaaaagaggcaaatctcaaagcttctaagacttggagaagag
ttccaggaagagctatctatttttctgaagcatcaccgaaatctgctgtggcttcatgaa
ttgtttctgcatcaattttcctcagcttctgaaactcttcatgtattggccctttctcaa
gatgagacctcaatatcagaagctgaagagaccacagaccatgtgcaaaacagatttata
accacattggcagatagaaagcgtcttttgaacctctcaaagattgctatcatggcagca
ggtaagaatactgactcggagacaaagatgaagcgaattgaagcagatttgaagattttg
aaattgcaggaagaaattctgaaagtacttcctgccaatgaagcaaatcaatatgacgga
cagaggctcttccgtcctgaagagctcatagagctgtgcttaaaagttcaaaacccagag
cttgcattgcggggctttgatgtgtttgcatggactagctcctcatttcgtagaagtcac
agaaaccttctggaggagtgctggaagaatgctgctgatcaggatgactggggtcaactc
catcaagcatctaaagatgaagggtggagtgatgaggaaatcttgcagcaactgagagat
acagtgctcttccaggcatcaagcagttgttacggacccaacgcagaaattatcgatgaa
ggttttgatgctgtcttgccattgagaaaagaaaactctgaagtttcggcattggaagat
ttggatttctctgtagaagcaatactgatgcagcacaaggattaccctgatgcaggaaag
ctaatgctgacagcaatcatgttaggaagtgtacatgacaattcaaaagtagaagagaat
ccttcttcaatggagtaa
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