KEGG   Populus nigra (Lombardy poplar): 133692248
Entry
133692248         CDS       T10372                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133692248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133692248
Spliceosome [BR:pnz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133692248
 Complex B
    133692248
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 133692248
NCBI-ProteinID: XP_061969026
LinkDB
Position
4:190610..193992
AA seq 273 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL
RRKLFGRYRGYRVSRSRSRSASPRKRERDYDRRERDYRDRDRDRDRDYRGNGRRNDKYDR
EGGRKRHGSPVREGSEERRARIEQWNREREEKQ
NT seq 822 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcttcaatcttcggtactgagaaagaccgagttaattgtcctttc
tacttcaagattggcgcatgccgtcacggcgatcgatgctctcgcctccacaaccgcccc
accatctctcccactctcttattatccaacatgtaccagcgtcctgacatgattactcct
ggcgtcgatgctcaaggtcagccacttgacccgcacaagatccaggagcattttgaagaa
ttttacgaggatatttttgaagaactgaacaaatttggcgagatcgagagcctcaatgtt
tgtgataatctcgctgatcacatgatcggtaacgtttatgttctgttcaaggaggaagac
caagctgcagccgctttgcaagctcttcaaggacgattttactctggtcgcccaatcatt
gctgatttctctcccgtcactgattttcgtgaagctacctgcaggcagtttgaggagaat
aactgcaaccgtggcggttattgtaattttatgcacgtgaagctgattgggagggatttg
cggagaaagttgtttggaagatatcgtggatatagggttagtaggagtcggagtaggagt
gcgagtcctaggaagagggagagagattatgataggcgtgagagggattacagggacaga
gatcgagacagagaccgtgattatcgtggaaatgggaggaggaatgacaagtatgacaga
gagggagggagaaaaagacatgggagtccagttagggaaggcagtgaggaacgaagggct
aggattgagcaatggaatagagagagggaggagaaacagtaa

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