Populus nigra (Lombardy poplar): 133692307
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Entry
133692307 CDS
T10372
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP22
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133692307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133692307
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133692307
Enzymes [BR:
pnz01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133692307
Spliceosome [BR:
pnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133692307
Chaperones and folding catalysts [BR:
pnz03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133692307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
133692307
NCBI-ProteinID:
XP_061969140
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All DBs
Position
1:48068132..48071226
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AA seq
187 aa
AA seq
DB search
MASGGGSVEWHLRPPNPKNPIVFFDVTIGTIPAGRIKMELFADIAPRTAENFRQFCTGEY
RKAGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCVSIYGLKFEDENFVAKHTGPGLLS
MANSGPNTNGCQFFMTCAKCDWLDNKHVVFGRVLGDGLLVIRKIENVATGPNNRPKLPCI
IAECGEM
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggaggaggcagcgtggagtggcacttgagaccaccaaacccaaaaaacccg
attgtctttttcgatgttaccatcggtaccatccctgctggtcgtatcaaaatggagctc
ttcgctgatattgcccctagaaccgccgaaaatttcaggcagttttgcacaggcgagtac
agaaaagctggattaccagttggttacaaaggatgtcaatttcatagagtgattaaagat
tttatgattcaagctggtgattttcttaagggtgatggtagtggttgtgtttctatttat
gggcttaagtttgaggatgaaaattttgttgctaaacataccggccctggtctactttca
atggcaaatagtgggccaaataccaatggttgtcagtttttcatgacttgtgcaaaatgt
gactggctcgacaataaacatgttgtattcgggagggtacttggagatggtcttttggtt
atccgaaagattgagaatgttgccacgggccccaacaaccgaccaaaactaccatgtatt
attgcagaatgcggagaaatgtag
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