Populus nigra (Lombardy poplar): 133692319
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Entry
133692319 CDS
T10372
Name
(RefSeq) isoamylase 3, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00500
Starch and sucrose metabolism
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
133692319
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
133692319
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
Methyltransf_3
Motif
Other DBs
NCBI-GeneID:
133692319
NCBI-ProteinID:
XP_061969163
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Position
4:7390610..7400696
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AA seq
778 aa
AA seq
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MLHQSLPLLCDSKIADSILLSVSHFSNNNNNNSIGSSRVLDVGLKFSKQSSGGGSSGRGF
SSKAGVKTTTTPNVYGRRAQESVLEQEEAPQKLGFKTFPGQAFPFGVSQVENGINFAIFS
QHATAVTLCLSLPHRGKSERTDGGMIEVALDPKVNKTGDIWHICIEDLPRDDVLYGYRID
GPRDWRQGHRFDSSIMLIDPYAKLVEGRRFFGDASRKLSKFYGTYDFDSLPFDWGDDYKP
PNIPEKDLVIYEMNVRAFTVDKSSGLDPSIRGSYLGVIEKIPHLLELGVNAVELLPVFEF
DEFEFQRRPNPRDHMINTWGYSTINFFAPMNRYASRGGGPHNASQEFKEMVKALHGAGIE
VILDVVFNHTNEADDKNPFTTSFRGIDNKVYYMVDLSNNGQLLNFSGCGNTLNCNHPVVM
ELILDSLRHWAIEYHVDGFRFDLASVLCRGTDGSPLDAPPIIRAIAKDSILSRCKIIAEP
WDCGGLYLVGNFPNWDRWAEWNGKYRDDIRKFIKGDSGMKGSFATRVAGSADLYRANKRK
PCHSVNFVIAHDGFTLRDLVSYNFKHNDANGEGGNDGCNDNFSWNCGFEGETDDHNIKAL
RFRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSINNFQWGLLDAEKSSHF
RFFSEVIKFRQTHEVFTHDNFLSENDVTWHENNWENHESKFLAFTLHDKNGGDIYLAFNA
HDYFVKVSIPPPPPKRRWLRVVDTNFESPDDFVPQGLPGIGSTYNVAPYSSILLEAKN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatcaatcacttccgctcctctgtgattccaaaattgctgacagcatacttctc
tctgtctcacatttctcaaacaacaacaacaacaacagtatcggctcttctcgtgttctc
gatgtgggattgaaattcagtaaacaatcatccggcggcggcagcagtgggcgaggattc
tccagcaaggctggagtcaagaccactacaacacctaatgtttacggtcgtcgtgctcaa
gaaagtgtgcttgagcaggaagaagcacctcaaaagttgggatttaaaacattcccaggt
caagcatttccatttggtgtttcacaagttgaaaatgggatcaattttgctatattttcg
cagcacgccactgctgttacactttgcttatcactccctcacaggggaaagtctgaaagg
acggatggtggaatgattgaggtggctttggatcccaaagttaataaaacgggagacatt
tggcacatatgcattgaggatttaccacgggacgacgtgctttatggttataggatagat
ggtcctcgagattggcgtcaaggacatcgatttgatagcagcatcatgcttattgatcct
tatgctaagctagttgaaggtcgccgattttttggtgatgccagccgtaagctgtcaaaa
ttttatggaacttatgattttgatagcttgccttttgattggggtgatgactacaagcct
ccaaatataccagagaaagatcttgttatatatgaaatgaatgtccgtgcgtttacagtc
gataaatccagtggcttggatccaagcatacgtggaagttaccttggcgtaattgagaag
atcccacatcttctagagcttggtgtcaatgcagtggagctgctgcctgtgtttgaattt
gatgaatttgagtttcagaggcgcccaaatcccagagatcacatgatcaatacatggggc
tattcaacaataaatttctttgctcctatgaatcggtatgctagtagaggtggtggacct
cataatgcatctcaggagttcaaggaaatggttaaagccttgcatggtgccggaattgag
gttattttggatgtagtctttaaccatacaaatgaggctgatgataaaaatccttttaca
acttcatttcgcggaatcgataataaggtttattacatggttgacctcagcaataatggc
cagttgctgaatttctctggatgtgggaacacattaaactgtaatcatcctgtggtcatg
gagctcatcctagacagcttaagacactgggccattgaatatcatgtggatggatttaga
tttgaccttgccagtgtactttgccgaggaacagatggttctccacttgacgctccccca
attattagggcaattgcaaaagattccatcctgtcaagatgtaaaattattgcagagcct
tgggactgtggaggcctttatctggttggaaattttccaaattgggacagatgggctgaa
tggaatggcaagtaccgtgatgacataagaaaatttattaagggtgattctggtatgaaa
ggaagttttgccacccgggttgctggatctgctgacctttacagagctaataagcgcaag
ccttgtcatagtgttaattttgttattgcacatgatggattcacgctgcgtgatcttgtt
tcatacaatttcaagcacaatgatgctaatggagaaggtggaaatgatggatgcaatgac
aattttagctggaattgtggatttgaaggagaaactgatgatcataatattaaagctttg
cgcttcaggcaaatgaaaaacttccatttagcattaatgatatctcagggaacaccaatg
atgcttatgggggacgaatatggacacactcgctatggaaataacaacagttatgggcat
gacacctctattaacaatttccagtgggggctcttggatgcagaaaagagtagtcacttc
aggttcttctcagaggtcataaagtttcgacagacacatgaagtatttactcatgacaat
tttctcagcgagaatgatgtgacatggcacgagaacaactgggagaatcacgaaagcaaa
tttcttgcatttacgcttcatgacaaaaacggaggagatatctatttggctttcaatgct
catgactattttgttaaagtttcaatacccccaccaccacccaagaggcgttggcttcgt
gtggtagacaccaattttgaatctccggatgactttgttcctcaaggtctcccaggcatt
ggaagcacctataatgtggctccatactcttcaattcttcttgaagctaaaaactga
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