Populus nigra (Lombardy poplar): 133692352
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Entry
133692352 CDS
T10372
Name
(RefSeq) ABC transporter B family member 2-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133692352
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133692352
04147 Exosome [BR:
pnz04147
]
133692352
04090 CD molecules [BR:
pnz04090
]
133692352
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133692352
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133692352
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133692352
CD molecules [BR:
pnz04090
]
Proteins
133692352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_21
AAA_15
DUF87
AAA_30
nSTAND1
AAA_19
DUF815
APS_kinase
Motif
Other DBs
NCBI-GeneID:
133692352
NCBI-ProteinID:
XP_061969211
LinkDB
All DBs
Position
1:complement(38417269..38426159)
Genome browser
AA seq
1249 aa
AA seq
DB search
MISISGNEDIDNMIMDKIQTKKEEAAGKKQQKVPLLKLFAFADFYDFVLMGLGSIGACIH
GASVPVFFIYFGKLINIIGLAYLFPQQTSHKVAKYSLDFLYLSVAMLFSSWTEVACWMHT
GERQAAKMRMAYLDSMLSQDISVFDTETSTAEVITSITSDILVVQDAISEKVGKLMHYLS
RFLVGFIIGFIRVWQISLVTLSMLPLIALAGGIYAYIATGLIINVRKSYVEASQIAQEVI
GNIRTVQSFTGEERAVRSYKEALRNTYKHGRKAGLTKGLGMGTLQSLLFLSWALLVWYTS
IVVHKNIANGGESFTTMLNVLIAGVSLGMAAPDISAFFRAMAAAYPIFEMIEKNTVSKSS
SKTGQKLGKLEGHIEFRDVCFCYPSRPDVIIFNKFRLDIPSGKIVALVGGSGSGKSTVIS
LIERFYEPLSGKILLDGNDIRDLDLKWLRQQIGLVNQEPALFATSIRENILYGKTDATLD
ELTSAAKLSEAMSFINNLPDGLETQVGERGIQLSGGQKQRIAISRAIIKNPSILLLDEAT
SALDAESEKSVQEALNHAMVGRTTVIVAHRLSTIRNADVTVVLQEGKIVEIGSHENLISN
PNSAYASLVHLQEEASVQCHSSVSPSVGWPLRQYSGGLSYTRTSFSASFRSEKDLHSHAG
VDTMEPIRPKPVSLKRLYSMLGPDWIYGVVGTISAFVAGALLPLFALGMAQSLVAYYMDW
HTTCQEIRKISILFCCGAVISIFAYAIMHLCFGIMGERLALRVREIMFSAILRNEIGWFD
DLNNTSPMLTGRLQSDAILLQTIVVDRTTILLHNVGLVVTSFIIAFILNWRITLVVIATY
PLLISGHISEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFSAEEKILHLYAHELV
EPSNRSFLRGQIAGIFYGVCQFFIFSSYALALWYGSVLMGKEISGFKSIMKSFFVLITTA
IAMGETLAMAPDILKGNQIAASVFELLDRKTQVVGDAGEELKNVEGTIELRGVQFSYPSR
PDTLIFKDFDLRVCSGKSMALVGQSGSGKSSVLALILRFYDPTAGKVMIDGIDIKKLKLK
FLRKHIGLVQQEPPLFATSIYENILYGKEGALEGEVIEAATLANAHSFISALPEGYSTKV
GERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMTNRTTVI
VAHRLSTIKNADEISVIQGGKIIQQGTHSNLINNMEGAYFKLVRLQQRE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaatttccggaaatgaagacatcgataatatgattatggacaagatccagacg
aagaaagaggaagctgcaggaaagaagcaacagaaagttcctttgctaaaacttttcgca
tttgccgatttttacgacttcgtgttgatggggctgggatcaatcggtgcttgtattcat
ggagcttcagtgcctgtcttcttcatttactttggaaaattgataaatatcattggactg
gcttatctctttcctcaacaaacttctcacaaagttgccaagtactcgttggattttcta
tatctcagtgtggccatgttattttcgtcatggacggaggtggcatgttggatgcatact
ggagaacgacaggcagcaaagatgagaatggcctacttggattcaatgttgagtcaagac
ataagcgtattcgacactgaaacatcaaccgcggaggtcataacctcaattacaagcgac
attcttgttgtgcaagatgccatttccgagaaggtagggaaattgatgcactatttaagc
cgatttctggttggctttattattggatttatcagggtatggcaaatcagtttggtgaca
ttgtctatgctccctttaatcgctcttgctggtggcatctacgcatacatagcaaccggc
cttattattaacgttcgcaaatcttatgtcgaggctagtcaaatcgctcaggaggtaatt
ggtaatattagaacagtgcaatcatttacaggagaagaaagggcagtgagatcatataaa
gaagctctaaggaatacctacaagcacggaagaaaagctggtttgacgaagggtcttgga
atgggaaccctgcagagtcttcttttcctctcgtgggctttacttgtttggtatactagc
atagttgttcataagaacattgccaatggtggtgaatccttcaccaccatgctcaatgtc
cttattgctggagtatccctgggaatggcagcaccagatatttctgcattttttcgagcc
atggcagcagcttaccccatttttgagatgattgagaagaacacagtaagcaaatcaagc
tcaaaaactggccaaaaactaggaaaattggagggtcacatcgaattcagggacgtatgt
ttttgctacccatcacgtcctgacgtaattattttcaataaatttcgtcttgatatacct
tctgggaagattgtagctcttgtcggaggaagtggatcaggaaagagtacggttatatct
ttgatcgaacgcttctatgagcctctatccggaaagatactgttagatgggaatgatatc
agggaccttgacctcaagtggctacggcaacaaattggactagtaaatcaggagcctgcc
ctttttgcaacaagtattagagagaacattctctacggaaaaactgatgccacccttgat
gaacttacaagtgctgctaaactttcagaagctatgtcctttatcaacaacctccctgat
ggattggaaactcaggttggtgagagaggaatacaactatcaggtggccaaaaacaaagg
attgcaatatcacgagcaataataaagaatccttcaattcttttactagatgaagctaca
agtgccctagatgctgagtctgagaaaagtgtgcaagaggcacttaatcatgccatggtg
ggaagaactactgtaattgtggctcatcgtctttcaaccattaggaacgcagatgtaact
gttgttcttcaggaagggaagatagtggaaatcggaagccatgaaaacctcatctcaaat
ccaaatagtgcatacgcatcacttgttcaccttcaggaggaagcttctgtgcaatgccac
tcctctgtaagtccttccgtgggatggccactcagacagtattcaggaggtttgtcctac
acaaggacaagctttagtgcgagttttcgttctgaaaaagatttacatagtcatgctggt
gttgatacaatggagcctatcaggccaaaacctgtttcactgaaaagactgtattccatg
cttggccctgattggatttatggcgttgttggaaccattagtgcctttgttgctggagcg
ctgctgccactttttgcattaggaatggctcaatctcttgtagcctattacatggactgg
cacacaacatgtcaagagatcagaaagatttcaatcctattttgctgtggtgcagtaatt
agtattttcgcctacgccattatgcatctgtgttttggaatcatgggagagcgacttgct
cttcgtgtgagagaaattatgttttctgccattctgaggaacgaaattggatggtttgat
gacttgaacaataccagtccaatgctcacaggacgtttacagagtgatgcaattttgttg
caaacaatagttgtggatcgcacaacaattctcttacacaatgttggtctggttgtcacc
tcatttatcattgctttcatcttaaactggaggatcacacttgttgtcatagccacatat
ccactcctgatcagtggtcacatcagcgagaaactctttatgcaaggctttggtggcaac
ttgagcaaagcatatttaaaggctaacatgctggctggtgaggctgtcagcaacatccgc
actgttgcagcattttctgctgaagagaagatccttcatctttatgcccatgagctcgtg
gaaccttccaaccgctcatttcttcgtggtcagatcgcaggaatattctatggtgtatgc
caattcttcatattctcatcttatgcgcttgcactatggtatggttctgttttgatggga
aaggagatttctggatttaaatctatcatgaagtcattttttgttttgattacaactgca
atagccatgggagaaactctggcgatggctccagatattctgaaagggaaccaaatagca
gcgtctgtcttcgagctgctggaccgcaagacacaggtggttggggatgctggagaagag
ttgaaaaatgtggaaggtacaattgagctaagaggggtccaattcagctatccttctaga
ccagatacattgattttcaaggacttcgatttaagagtgtgttcaggcaagagtatggct
ttagtgggccaaagtggctccggtaaaagttctgttcttgctctgattcttcgtttctat
gatccaacagcaggaaaagtgatgattgatggcatagacatcaagaaactgaagctgaaa
ttccttcggaaacacattggtcttgtccaacaagagccacctctttttgccacctcaatc
tatgagaacatcttatatggaaaagaaggggccttggaaggagaagtaattgaagcggct
acgcttgctaatgctcatagtttcatcagcgcccttcccgagggctactcaacaaaggtt
ggtgaacgaggggtgcaactatctggtggccagaagcaaagagtggccattgcccgagca
gttctgaaaaacccagaaatcctgctattagacgaggcgaccagtgctctagacgtggag
tcagagcgtgtcgtgcaacaagctctagatagattgatgacaaaccgaacaacagtcata
gtagcacacaggttgtccactataaagaatgctgatgaaatatcagttatacaaggtggg
aagataatacagcaaggcacccattccaatcttataaacaacatggaaggagcatatttt
aagttagtaagacttcagcagagagaataa
DBGET
integrated database retrieval system
