Populus nigra (Lombardy poplar): 133692359
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Entry
133692359 CDS
T10372
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133692359
Membrane trafficking [BR:
pnz04131
]
Autophagy
Other autophagy associated proteins
Others
133692359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_IFT140_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
133692359
NCBI-ProteinID:
XP_061969225
LinkDB
All DBs
Position
4:complement(17204185..17207563)
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AA seq
434 aa
AA seq
DB search
MATLSEYSSPPWPNPDPNRELLAPQDELDSQTHSLSEPQSCGSLSSIMPPNPNPNPNPFS
NYNTSISSQPQSTSQPPPISLLHVSFNQDSGCFAAGTDHGFRIYNCDPFREIFRRDFDGS
GNSGGGIGAVEMLFRCNVLALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSEVRSVKL
RRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSHGAGSLVLVCPGLQKGQVRV
EHYASKRTKFIMAHDSRTACFALTQDGQLLATASTKGTLVRIFNTADGTLLQEVRRGADR
AEVYSLAFSSTAQWLAVSSDKGTVHVFSLKINPGSPVIDRSQSTNDPNLAVTSPASSLSF
FKGVLPKYFSSEWSVAQFHLIEGSQYIVAFGHQKNTVVILGLDGSFYRCQFDPVNGGEMT
QLEYHNFLKPEAAF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctactctctcagagtactcctctcctccatggcctaacccggaccctaaccgggaa
cttctggcccctcaagatgaactcgattcccaaactcattccctgtctgagcctcaatct
tgcggttccctctcttctattatgcctccaaaccctaaccctaaccctaaccccttttcc
aattacaacacctctatatcttctcagcctcaatcaacctcacagccgcctccgatttct
cttctccacgtctccttcaaccaggattctgggtgtttcgcggcaggaactgaccacggg
tttcggatctacaactgcgaccccttccgcgagatcttccgtcgcgacttcgatggcagc
ggaaatagtggcggcgggattggagcggttgagatgctttttagatgcaatgttttagct
cttgttggtggtggacctgaccctcagtaccctccgaacaaggtcatgatctgggacgac
catcagagtcgatgcatcggcgagctatcgtttcggtctgaggtccggtccgtgaagcta
agacgggataggattattgttgttttggagcagaaaatatttgtttataactttgcggat
ttgaagcttttgcatcagattgaaaccattgcgaatccgaaagggctttgtgcggtttcg
catggagcaggatcgttagttttggtttgtccaggattgcagaaaggtcaggttagggtg
gagcattacgcttcaaaacgaactaagtttattatggcgcatgattcgaggactgcgtgt
tttgctctcacgcaggatgggcagttgctggctactgctagcactaagggtactctcgtt
cggattttcaatacagctgatggcaccctgcttcaagaggtgaggaggggtgcagataga
gcagaagtttatagtttggcattttcttcaactgcccagtggctagctgtctcaagtgat
aagggcacagtccatgtcttcagccttaagattaatccaggatctccagtgattgacagg
tcacagagcacaaatgaccctaatcttgctgttacatcacctgcctcttcattatctttc
ttcaaaggagttttaccaaagtatttcagctcagagtggtcggtggctcagtttcactta
attgagggttctcagtacattgttgcttttggtcaccaaaagaatacggtggttattctt
ggtttggatgggagtttctatcggtgtcagtttgatcctgtgaatggtggagagatgact
cagctggaatatcacaacttcttgaagccagaagcagccttttaa
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integrated database retrieval system
