Populus nigra (Lombardy poplar): 133692361
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Entry
133692361 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133692361
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133692361
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133692361
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133692361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Trehalase
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
133692361
NCBI-ProteinID:
XP_061969229
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All DBs
Position
4:14949187..14953893
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AA seq
819 aa
AA seq
DB search
MDDSCAVCAEALEWVAYGACGHRDVCSTCVTRLRFICDDRRCCICKTESSVVFVTKALGD
YTRMINDFLLLPSEPKEGRMGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKEESND
GSKRRGKFRNINQLKGHLFHQHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHINTGDSEV
DGSESERGGFMGHPMCEFCKKPFYGDNELYTHMSTEHYTCHLCQRQHPGQYEYYKNYDDL
EIHFRRDHFLCDDEGCLAKKFIVFQTEAELKRHNTIEHAGHMSRSQRNAALQIPTSFRYR
RSNEQDNRHGRGRTFHRDQSDNQLSIAIQASLEAAYSESSSRDRSSSAQAISDHVDLSDI
DPIVQPFESLSATDPETTLRYLQALGPSSRNAPLQESSFPPLFTTTSSGQQKAKDESESL
PNNTMATHLRRQNNRNATVVNSPQQWPAASRGHVSSSPALYRPTVDTSPLSSRSSASGPG
LSSYASSIQSHAQTRPAAVRGHPSAGSVGISGTTSRISSTASASNLADSGSLKPSISDFP
PVSAVPMHKMPTSSQVVLNVEEFQTANKSLVEKIRAALENDEDRYTLFKDISGQYRQGSI
DTGEYLDYVQQFGLSHLIPELARLCPDAQKQKELVETYNASLRSSGKKENGWGRGSAQLK
GNNGSKEGKGIAENDSSSKDRLTDNFINTVRALQSNYKPVEDEAQLLSKDGYRAAKGKSN
VMLDERQMEPRIQNGSLSAGDGSSKNLKDGGTEKQRKKTSKVHRARLGDGSMAALLDLQN
SEPDPRETVENRIDDSSNSVGGLPVRGVWRKGGGQKLFP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgtgcggtgtgtgcggaggctctagaatgggttgcatacggcgcgtgt
ggccatcgtgacgtttgctccacgtgcgtcactcggctccgtttcatatgcgacgatcgc
cgctgctgtatctgcaagaccgagtcatctgtggtttttgtcaccaaggctttaggggat
tatacaaggatgattaatgactttttgctcttgccatctgaaccaaaggagggtcgaatg
ggatcttactggtaccatgaggacacacaagcattttttgacgatgttgaccattataaa
atgataaaggccatgtgcagattgtcatgtagtgtatgtgacaaggaggaatcaaatgat
ggatccaagcgtcgggggaagtttagaaatattaatcagctgaagggtcatttatttcat
caacataaattgcatatgtgtagcctatgcttggaaggacgaaaggtttttatttgtgag
caaaagctatacactagagcacaattgaatcagcatataaacacgggtgattctgaggtt
gacggaagtgaaagtgaaagaggtggctttatgggacatcccatgtgtgaattctgtaaa
aaaccattctatggagataatgagttgtatacacatatgtcaaccgaacactacacctgt
catctatgccagaggcagcatccaggacaatatgaatattacaagaattatgatgaccta
gagattcacttccgtcgagaccattttctatgtgatgatgagggctgtcttgccaagaag
tttattgtctttcaaactgaagcagagttgaagagacataatacaattgaacatgctggt
catatgtctcgttctcagcgaaatgctgctctccagataccaactagctttcgatatcgt
cgaagtaatgaacaagataatcgtcatggaaggggacgaacattccatcgtgatcaatca
gataaccaactctccatagccattcaggctagcctggaggcagcatattcagaaagctca
tctcgtgatcgatcatccagtgcacaagcgatctctgatcatgtagatttaagtgatatt
gatccaatagttcagccatttgaatcattatctgctactgatcctgaaacaacattgaga
tatcttcaagccttggggccttcttctaggaatgcacctttgcaagaatcttcctttcct
cctctctttacgactacaagcagtggtcaacaaaaggccaaagatgaatcagaaagtttg
cctaataatacaatggcgacgcatcttcggcgccagaacaacagaaatgcaacagtagtc
aactcaccccagcagtggccggcagcaagccgcggacatgtatcaagtagtccagcacta
tataggcctacagtagatacatcacctttgagttcaaggagttctgctagtggaccgggt
ctctctagttatgcaagttctattcagtcccatgctcagactcgacctgcagcagtccgt
gggcatccctcggctggttcagtggggatctcaggcactacaagtaggataagcagcact
gcatcagcctcaaatcttgctgactctggatcattgaagccctctatttcagattttcct
ccagtttctgcagtgccaatgcacaagatgcctactagtagccaggttgtgctgaatgtg
gaagaatttcaaactgcaaacaagtcattggtggaaaagatacgtgctgctcttgaaaat
gatgaagatagatatactctttttaaagatatatctggacagtatcgtcagggttcaatt
gacacaggtgagtacctggactatgtccagcaatttggcttatcacatctcattcctgag
ctggctagactttgccctgatgctcagaaacagaaagagcttgttgaaacctacaatgct
agcttgagaagcagtgggaagaaagagaatggctggggccgtggtagtgcccagttaaaa
ggcaataatggatccaaggaaggcaagggaatagctgaaaatgatagcagttcaaaggat
agattgacagataactttattaatactgttcgagcgctgcagtcaaattacaagcctgtg
gaagatgaggcgcagctgctgtcaaaggatgggtatcgggctgccaaaggtaagtcaaat
gtcatgcttgatgagcggcaaatggaaccaagaatccaaaatggctctttatctgctggt
gatggatctagtaaaaacctaaaagatgggggtaccgagaagcaacggaagaaaacctcc
aaggttcatagagcaaggcttggtgatggctcaatggcggccctgttggatctccaaaac
tctgaacctgatcctcgcgaaacagtggagaacaggatagacgatagcagtaactcagta
ggagggttacctgtgcgtggagtctggagaaaaggtggggggcaaaaactctttccatga
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