Populus nigra (Lombardy poplar): 133692550
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Entry
133692550 CDS
T10372
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133692550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133692550
03036 Chromosome and associated proteins [BR:
pnz03036
]
133692550
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133692550
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133692550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
133692550
NCBI-ProteinID:
XP_061969573
LinkDB
All DBs
Position
1:complement(1972843..1979663)
Genome browser
AA seq
1042 aa
AA seq
DB search
MFGASNPFGQSSNSPFGTTQPVFGQASNVSSSPFALKPFGSPTTPFGAQTGSSMFGGTST
GMFGAPQTSSFSATNAFGSSTPAFGASTTPAFGSSSSSAFGAGSSVFGQKPFGGFGSTTQ
TSPFGNTNQQPQPGFGSTTQTSPFGNTNQQPQPGFGSTTQTSPFGNTNQQPQPGFGNNSL
FGSTPFGAPSQSAFGAASTPAFGATTAPAFGATSTTPAFGSTSTTPAFGAPSTTPAFGST
ATPGFGSTGASYTSSPLFGAGGAFGTSTSVFGSSATTPAFGGLTGSGFGTPTTPAFGATT
TSAFGATSSPSFTFSSSPGFGQSTSTFGSSPFGSTTSTFPAQPSPFGAQPTTSAFGNTGF
AQPGFGGHRPGTRAAPYAETAEAEGGAQAGKLVSISAMPAYKDKSHEELRWEDYQLGDKG
GPLPPGQSPGGAGYSMSTPQANPFAPSTGLGQTSTNMFSSTATNLFAPKTQTSAPSFTTA
SPFGPSTSSNLFQPSTPAFSVGSSPSLFGSTSMPNFSTTPSLFSSTTGQGNASPFGSNMF
NNTQSSLSFPSTTPSMGQTTAFPQSNPFGPSTTSSLFSSPATGGLFTSTQSQITSNLGGF
NQMTPSQPAQNAGIFALNFNQTQAAGNSGFAGVSSNFGQPFTTQNAVAVQPVPITNPFGT
LPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQRRIRLPMRKYYPK
HDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRESAEKASPLNASAPV
HENGKFSVSEDACPSNGSTAGDKNKNSAENGVIKEQVKVNQKPNGVHEDHATQKEESYMT
LSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHVKDFVVG
RHGYGSIKFLVETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKC
IDKKTGRQFTEGPKIERYKEMLKRKAEDQGAEFVSYDPVKGEWKFKVNHFSKYMLEDEEE
EAEDWDVQATCNKVDDCLVLKA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagcaatccttttgggcagtcttctaatagtccgtttgggacgacacag
ccggtttttggtcaggctagtaatgtaagtagtagtccttttgctctgaaaccctttggt
agtccaacaactccttttggtgcacaaacagggagttccatgtttgggggcacttctact
ggtatgtttggtgcaccccaaacttcttcattttctgcgacaaatgcttttggtagctca
acgcctgcttttggagcatctactacccctgcatttggtagttcgtcatcatcagcattt
ggtgcaggttcttctgtttttggtcagaagcccttcggaggctttgggtctaccactcaa
acaagtccatttggaaacacaaatcaacagccacagccaggctttgggtctaccactcaa
acaagtccgtttggaaacacaaatcagcagccacagccaggctttgggtctaccactcaa
acaagtccgtttggaaacacaaatcagcagccacagccaggctttggaaacaatagttta
tttggttcaacaccttttggtgcgccatctcagtctgcatttggtgctgctagtactcca
gcctttggtgcgacaactgccccagcctttggtgccacaagcaccactccagcctttggt
tccacaagcaccactccagcctttggcgccccaagcaccactccagcctttggctcaaca
gcaactccaggttttggtagtacaggagcttcatataccagttcgccactgtttggagct
ggtggagcttttggaacttccacttcagtttttggatcttcagctactacacctgctttt
gggggtttgactggttctggctttggcactccaaccactcctgcctttggggctacaact
acttctgcctttggggctacatcttccccatcctttacgttttcatcaagtccaggtttt
ggccaatcaacttctacttttgggagcagcccatttggaagtactacatctacttttcct
gcccagccttctccctttggagctcagcctacaacatcagcatttggaaacactggcttt
gcccagccagggtttggggggcaccgtcctggaactagagcagcaccttatgcagaaact
gctgaggcagaaggtggtgcacaggctggaaaattagtgtcaatatcagccatgcctgcc
tacaaagataaaagccatgaagagctaaggtgggaggactatcaattgggagacaaaggt
ggaccgcttcctcctggtcaatctcctggtggggctggatatagcatgtctaccccacag
gcgaatccttttgctccttcaactggacttggtcaaacatctacaaatatgttttcttca
acagccacaaacctgtttgctccaaaaactcaaacatctgcaccttcattcaccaccgcc
tccccttttggcccttcaacgtcatccaacctctttcagccatcaacacctgcattctca
gttggttcatctccatctctttttggatcaacaagcatgcctaattttagtacaacacca
tccttgtttagttctactacaggccaaggaaatgcttcaccatttggttccaatatgttt
aataacactcaatcatctctctcattcccatctaccacaccttcaatggggcagacaact
gcatttccacagtccaatccatttggaccaagtaccaccagttccttgttcagtagccct
gctactggcggccttttcacaagcactcaatctcagataacttcaaaccttggggggttt
aatcaaatgactccatctcaaccagctcagaatgcaggtatttttgccttgaacttcaat
cagacacaagcagctggtaacagtggctttgctggtgtatcaagtaattttggacaaccg
tttacgacacaaaatgctgttgctgtacaaccagtgcctattacaaatccatttggaaca
cttcctgcaatgcctcaagtgtcctttggtcgagctggaactacaccttcagttcaatat
ggaatctctactatgcctgttgttgagaaaccctctcccattagaatatcatctttattg
acttctaggcacttgtcacaaaggaggatcaggttgcccatgaggaaatattatcctaag
catgatggaccaaaggttccatttttcagtgatgaagaagaaacacccagcacaccgaag
gcagatgctcttttcattccaagggaaaacccaagagctctagtcattcgtcctatggac
cagtggccttcaagggaaagtgcagagaaagcatctccattgaatgcatcagcacctgta
catgagaacggaaaattttcagtatcagaagatgcttgtccctcaaatggttccactgct
ggtgataaaaataaaaattcagctgagaatggtgtaatcaaggagcaagttaaagtcaac
cagaaacctaatggagtccatgaggatcatgcgactcagaaagaggagtcctacatgaca
cttagtggtcacagagctggtgaggctgcaattgtgtatgagcatggagcggatattgag
gcactaatgccaaaactccgacgttctgactatttcaccgagcctcgtatccaggaactg
gcagccaaggagagggctagaccaggattctgccgacatgttaaggattttgtggttgga
aggcatggctatggaagcatcaagttcctggttgaaacagatgttcgaaggcttgatctt
gagtcccttgttcagtttaataaccgtgaagttatcgtgtacatggatgatagcaagaaa
ccgcctgtcggacagggtctcaacaagcctgctgaggtaacacttctcaacataaaatgc
atcgacaaaaagactggacgccagttcacagaaggaccaaaaatcgagagatacaaggag
atgctcaaaagaaaagctgaagaccaaggcgccgaatttgtttcttatgaccctgttaaa
ggagagtggaagttcaaggtcaaccatttcagcaagtacatgctggaggatgaagaggag
gaggcggaggattgggatgtgcaagctacctgtaataaagttgatgactgcttggtgctg
aaggcgtga
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integrated database retrieval system
