Populus nigra (Lombardy poplar): 133692554
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Entry
133692554 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133692554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133692554
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133692554
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133692554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
TerY_C
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
133692554
NCBI-ProteinID:
XP_061969579
LinkDB
All DBs
Position
4:complement(13030480..13033909)
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AA seq
330 aa
AA seq
DB search
MELDSIECVPSLDLTDEDEIHHHHHLHHFPSVSKPHTTTTTNNSNSNSNSNTVASAIHTT
SVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAE
SLELPCKYMSLGCPEIFPYYSKLKHETLCNFRPYSCPYAGSECAIVGDIPFLVAHLRDDH
KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF
MGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD
RKELKLRVTGRIWKEQQNPEGGACIPNLCS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcattgaatgtgtgccatccttagatttaacagatgaggatgagatc
caccaccaccaccatctccaccatttcccttctgtttcaaagccacacaccaccaccacc
accaacaacagcaacagcaacagcaatagtaataccgtggcttcagctatacacactacc
agtgttcatgagctccttgaatgccctgtttgtaccaattctatgtaccctcctattcat
cagtgccacaatggccacacactctgttcaacctgtaaaacacgagtacaaaatcggtgc
cccacttgtagacaggagctcggtgacattagatgtctagcattggaaaaagtagctgaa
tcacttgagctgccttgcaaatacatgtcgcttggatgcccagagatttttccatactat
agtaaactgaaacatgagaccctgtgcaattttaggccatacagctgtccatatgctgga
tcagagtgtgctattgtcggggatatcccattccttgtagctcatctaagagatgatcac
aaggtggacatgcattccgggtgtactttcaaccatcgctatgtcaagtccaatcctcgt
gaagtagaaaatgcaacatggatgttaactgttttccactgttttggccagtatttctgc
ctccattttgaagctttccaactcgggatggctcctgtttatatggcattcctcagattc
atgggtgatgaggcagaggccaggaattacagctacagcctggaggttgggggaaatggt
cggaaactaatctgggaaggcacaccacggagtataagagatagtcacaggaaggttagg
gacagccatgatggacttattatacaacgtaacatggcacttttcttctctggaggagat
aggaaggagttaaagctgcgagttacaggacggatatggaaagaacagcagaacccggaa
ggtggggcatgcattcccaacctttgtagttag
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