Populus nigra (Lombardy poplar): 133692753
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Entry
133692753 CDS
T10372
Name
(RefSeq) protein SLOW WALKER 1-like isoform X1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133692753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133692753
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133692753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WDR55
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
DSE1_N
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_DCAF4
Beta-prop_DCAF12
Utp13
Motif
Other DBs
NCBI-GeneID:
133692753
NCBI-ProteinID:
XP_061969869
LinkDB
All DBs
Position
4:19808256..19810425
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AA seq
534 aa
AA seq
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MADLLVEQPREITISKTFPTKPKLKRKSKTPSKTPESKYWSSFKSHQISNLISSIPSIDF
SPISPHQFAATNSASLTLFSSKTLSPTSTISFSDVVTSCSFRCDGSLIAASDLSGLIRVF
DVKTRTPLRRLKSHARPVRFVKYPLLDKLHLVSGGDDSVVKYWDVAGESVVSDLYGHRDY
ARCGDCSPINGEIFVTGSYDHTVKLWDVRVDSKESVIEVNHGKPVEDVIFLPSGGMIATA
GGNSVKIWDMIGGGKMVYSMESHNKTVTSICVGKVGKESEEEALQYRILSVALDGYMKVF
DYAKMKVTHSMRFPAPLMSIGFSPDCMTRVIGSSNGIIFAGRRKGKEDVGESKLGNFWAL
GSVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRPKKVKLSEHDKLLKKFRHKEALVS
VLSGKNPENVVAVMEEMVARRKLLKCVVNLDEEELGLLLGFLHKHSTMPRHSSLLMGLTK
KVVEMRADDIRASDALKSHIRNLKRSVEEEIRIQHSLQEIQGIISPLLRIAGRR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccttcttgtagaacaaccccgagaaatcaccatctctaaaaccttccctaca
aaaccaaaactaaaacgcaaatctaaaaccccatcgaaaacccctgaatccaaatactgg
tcttccttcaaatcccaccaaatttcaaacctcatctcatccatcccttccattgatttc
tcacctatatccccacaccaatttgccgccaccaattccgcctccctcactctcttctcc
tccaaaacactctctcccacatccaccatctccttctccgatgttgtcacctcctgctcc
ttccgctgcgacggctccctgatcgctgcctccgatctctccggccttattcgggtattc
gatgtaaagacacgaacccctcttcgtcgcctgaagtcccacgcgcgccctgttcgtttt
gttaagtacccgttactcgataagctacatttggtgtctggtggtgatgattctgttgtt
aaatactgggatgttgctggagagagtgtggtttcggatttgtatggtcacagggactat
gcgaggtgtggtgattgctctccgattaatggagagatatttgttactgggtcttatgat
cacactgtaaagctgtgggatgtgagggttgatagtaaggaatcagttatcgaagtgaat
catggaaagccagttgaggatgtgattttcttgccctcaggcggaatgattgcgactgca
ggaggaaatagtgtgaagatatgggatatgattggaggagggaagatggtttattcgatg
gagagtcataacaagactgtcacttctatttgtgtagggaaagtagggaaagagagtgaa
gaggaggctttgcagtataggattttgagtgtggctttagatgggtatatgaaggttttt
gattatgcaaaaatgaaggttactcattccatgaggtttcctgccccgcttatgtccatt
gggttttctccggattgtatgactagggtcattgggtcttccaatgggattatatttgct
gggaggagaaaaggaaaggaggatgtgggagagagtaaattagggaatttttgggcgctg
ggcagtgtagaggaaccacagaggcgggctttgaggccaacatattttaggtattttcat
aggagtcaaggggagaagccaaatgagggggatcatttgataatgaggccaaagaaggtg
aaattgtcggagcatgataagttgttgaagaagtttaggcataaagaagcgctggtttca
gttttgagtgggaagaatccagagaatgtggtggctgtgatggaggaaatggtggcaagg
aggaagttattgaaatgtgttgtgaatttggatgaggaggagcttgggttgttgttgggt
ttcttgcataagcactcaactatgccaagacattcaagtttattgatggggctgactaaa
aaggtagttgaaatgcgggctgatgatattagagcttctgatgctttgaaaagtcatatt
agaaacctgaaaaggtcagttgaagaggagatcagaattcaacattcactacaagagata
cagggtataatttctcctttattgagaattgccgggagaagatag
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