Populus nigra (Lombardy poplar): 133692886
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Entry
133692886 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133692886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133692886
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133692886
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133692886
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
Prok-RING_4
YpzI
zf-Di19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
133692886
NCBI-ProteinID:
XP_061970068
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Position
1:49840968..49843922
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AA seq
286 aa
AA seq
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MATSAAELRGSHFRKAATPNTGNLGKQSTSNMQDLLDCPVCFTMMYPPIFQCPNGHTLCS
QCRARVKNSCPICRGELGNIRCLALEKIAESIELPCMYQSAGCCDIFPYYSKPKHEENCK
YRPYNCPYAGAECSVTGDISLLIKHLKNDHKVDMHDGCTFNHRYVKSDAGEIDNATWMLT
VFNCFGRQFCLHFETFFIGMSPVYMAFLRFMGTEDEAREFSYSIEVGGNGRKLTWQGVPR
SIRDSHQKVRDSQDGLIIQRNLALFFSGGDRQELKLKVSGRIWKEQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctgctgctgagttaagaggctcccatttcagaaaagctgcaacccctaac
actggaaatctgggaaaacaatcaactagtaacatgcaagaccttcttgactgtcctgtt
tgcttcactatgatgtaccctccaattttccagtgtccaaatggccacactctatgctca
caatgcagggccagagtaaagaactcttgcccaatttgccgaggagagctaggaaatata
aggtgcttggctctggaaaaaattgctgagtcaatagaacttccttgcatgtaccaaagt
gcgggatgttgtgacatatttccctactacagcaagccaaaacatgaagagaactgcaaa
tatcgtccttacaactgcccttatgctggagctgaatgttctgtcactggtgacatttca
cttctcatcaagcatcttaagaatgatcataaggttgatatgcatgatggatgcaccttc
aatcacagatatgtcaagtctgatgccggagaaatcgacaatgccacatggatgttaact
gtttttaattgttttggccgacagttttgcttgcactttgagactttttttataggaatg
tcacctgtttacatggccttcctaagattcatgggcaccgaagacgaggcaagggaattc
agttatagtattgaagttggtggtaatggaagaaagcttacatggcaaggagttcccaga
agtataagggatagccatcagaaagttagagacagccaagatggactgatcattcagaga
aacttggcacttttcttctccggaggggatcggcaggagttaaaactgaaagtttcagga
cggatttggaaagaacagtga
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