KEGG   Populus nigra (Lombardy poplar): 133692935
Entry
133692935         CDS       T10372                                 
Name
(RefSeq) uncharacterized protein LOC133692935
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133692935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133692935
Enzymes [BR:pnz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133692935
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133692935
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11 Prok-RING_4 Baculo_IE-1 zf-RING_10 Sina_RING zf-rbx1 U-box zf-RING_6
Other DBs
NCBI-GeneID: 133692935
NCBI-ProteinID: XP_061970099
LinkDB
Position
4:complement(10021246..10022877)
AA seq 227 aa
MASGFGESTSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL
HFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPE
PNHFGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPAG
FPYGFNSFHGGHPHGYRQHHGQGQQDYYLKRLLLFIGFCVFLALIWQ
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcaagtgggtttggggaatcgactagcagggctcctcataactcttcatttactagc
aacaatggaaatggtgatgctggtaattttgaatgcaatatttgctttgacttagctcag
gatccgattgtaactttgtgtggccatcttttctgctggccttgtctctacaaatggctt
cactttcactcaaaatcccgggaatgtccggtttgtaaggctctagtggaagaggagaag
ttagttcctttgtatggcagagggaaaacgtcgactgacccgagatcaaagtccattcct
ggtgttaatattcccaaccgtcctgcaggacagcgacctgaaactgctcctcctccagaa
ccaaatcattttggccagcatgggtttggatttatgggagggttgggaggttttgcacca
atggcaactgccaggcttgggaatttcacattttctgctgcttttggtggtcttatccct
tcactttttaaccttcaagtgcatggatttcctgatgctgccatgtatggtcctgctggc
tttccttacgggtttaattcatttcatggcggccatccacatggatatcgtcagcaccat
ggtcaaggacagcaggattattacctgaagaggctgcttttgtttattggtttttgtgtt
ttccttgctcttatttggcaataa

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