Populus nigra (Lombardy poplar): 133692945
Help
Entry
133692945 CDS
T10372
Name
(RefSeq) histone acetyltransferase GCN5-like isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133692945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133692945
03036 Chromosome and associated proteins [BR:
pnz03036
]
133692945
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
133692945
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133692945
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
133692945
HAT complexes
PCAF complex
133692945
STAGA complex
133692945
TFTC complex
133692945
SAGA complex
133692945
SLIK complex
133692945
ADA-HAT complex
133692945
HAT-A2 complex
133692945
ATAC complex
133692945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
NKAP
Motif
Other DBs
NCBI-GeneID:
133692945
NCBI-ProteinID:
XP_061970111
LinkDB
All DBs
Position
4:complement(2996016..3003092)
Genome browser
AA seq
558 aa
AA seq
DB search
MDTHSHLTAPNRSRSSQSPSPSHSASASATSSIHKRKRAAAAAASDDHLPPLAPSSFSAD
TRDGALTSNDDLESISARGADSDSDEAEDSDAVVDDDEDEFDNDSSMRTFTAARLETTAG
VSAAGSSGRNAKIKIENTNVKIENSDSGKDGGHTGTGAVGPAAAGSSAPGIVVKEVSLKI
FTENLQTSGAYSAREENLKREEEAGRLKFVCYSNDGIDEHMVWLIGLKNIFARQLPNMPK
EYIVRLLMDRSHKSVMVIRHNLVVGGITYRPYTSQKFGEIAFCAITADEQVKGYGTRLMN
HLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIYLEKDRWHGYIKDYDGGILMECRI
DQKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKIIKIEDIPGLR
EAGWAPDQWGHSRFKTLNSSKDSGTNQKHLTAFMRSLLKQSMHDHVDAWPFKEPVDACDV
PDYYDIIKDPMDLKTMSKRVESEQYYVTLEMFIADVKRMCANARTYNTPDTIYYKCATRL
EAHFQSKVQSGIQSKILP
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacactcactctcacttaaccgcacccaatcgctctcgcagctcccagtccccgtcc
ccttcccactcagcttcggcgtcagcaacctcttccatccacaagcggaaacgtgcggcg
gctgcggcggcgtccgatgaccatttgcctccacttgctccgtcttctttctccgcagac
actcgagacggtgctctgacctccaacgacgaccttgagagcatctccgcccgcggcgcc
gactccgattccgacgaagctgaagattccgacgccgttgttgatgatgacgaggacgaa
tttgacaatgactcttccatgagaacgttcaccgcagcccgcctcgagaccactgccggt
gtctccgccgctggcagcagcggtcggaacgcgaagataaaaatagagaatacgaatgtg
aagattgaaaattctgatagcgggaaggatggtgggcacacggggactggtgcagtgggg
cctgccgcagcgggaagttctgctccagggattgtggtaaaggaggtttctcttaaaata
tttacggagaatttgcagactagtggagcttatagcgcgagagaagagaatttgaagaga
gaggaggaagcaggaagactcaagtttgtctgttattcaaatgatggtattgatgagcat
atggtttggctgataggattgaagaatatatttgcgaggcaattgcctaacatgcccaaa
gagtatattgttcgtctgttgatggatagaagccacaaatctgtgatggttattagacac
aatctggtggttggtggcatcacttatcgtccatataccagtcagaagtttggggagata
gctttttgtgcaatcactgcagatgaacaagtaaaaggttacggcacaagattgatgaat
catttaaagcagcatgcacgtgatgttgatgggttaacacattttctgacatatgctgac
aataatgctgttggttattttatcaaacagggtttcacaaaagagatttacttggagaaa
gatcgatggcatgggtatattaaagactatgatggaggtatcttaatggagtgcagaatt
gatcaaaaacttccttacactgatttatcaaccatgatccgtcgtcagagacaggcaatt
gatgaaaagatacgagagctatccaattgccacattgtctatcctggaattgattttcaa
aagaaagaagctggtattcccaagaagatcatcaaaattgaggacattcctggcttgagg
gaggcagggtgggctcctgatcagtggggccattcacggttcaaaacgttaaactcttct
aaggatagtggcacaaatcaaaaacatttgactgcatttatgcgctcacttttgaagcag
tccatgcatgaccatgttgatgcttggccattcaaggaaccagttgatgcttgtgatgtc
cctgattattatgacatcatcaaggatcccatggatctgaagacaatgtcgaagagggta
gagtcagagcaatactatgtaacactcgagatgttcattgctgatgtcaagaggatgtgt
gccaatgcacggacatacaacacacctgataccatttattacaagtgtgcaaccaggcta
gaagcccatttccaaagcaaagtccaatcaggcatccagtcaaaaattttgccatga
DBGET
integrated database retrieval system
