Populus nigra (Lombardy poplar): 133693118
Help
Entry
133693118 CDS
T10372
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like isoform X1
KO
K14848
ribosome assembly protein RRB1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133693118
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133693118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
RMC1_N
PALB2_WD40
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
133693118
NCBI-ProteinID:
XP_061970223
LinkDB
All DBs
Position
5:complement(18932546..18936689)
Genome browser
AA seq
478 aa
AA seq
DB search
MVRSIKNPKKAKRKNKKGDESSSSSSIPSMPTKVWQPGVDKLGEEEELECDPTAYNSLHA
FHIGWPCLSFDVVRDSLGLLRTDFPHTVYFVAGTQAEKPDWNSIGIFKVSNVSGKQRELV
PSKTTAGDSDMDTDNSDSDEDSEDEEEGGSATPVLQLRKVAHRGCINRIRAMTQNPHICA
SWSDAGYVQIWDFSTHLNALAESETEVPRGASSVFNQAPLFNFKGHKDEGYAIDWSPRVA
GRLVTGDCKNCIHLWEPTSGATWNVDATPFTGHTASVEDLQWSSTEDHVFASCSVDGHIA
IWDARLGKSPAIYFKAHNADVNVISWNRLASVMLASGSDDGTFSIRDLRLLSPKSQEEDK
SLVAHFQYHKHPITSIEWSPHEASTLAVSSSDNQLTIWDLSLEKDEEEEAEFKAKTKEQV
NAPADLPPQLLFVHQGQKDLKELHWHAQIPGMIVSTASDGFNILMPSNIQSTLPSEGV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcagcataaaaaatccaaagaaggcaaagagaaagaacaagaaaggagatgag
tcatcttcttcttcatcaataccatccatgcctacgaaggtctggcaaccaggtgtcgac
aagcttggagaagaagaagaacttgagtgtgaccctaccgcgtacaattcccttcacgcc
tttcacattggctggccctgcttaagttttgatgtagtgcgcgattcacttggtttgctt
cggactgattttccacacacagtgtattttgttgctggaactcaggcagaaaaacctgat
tggaactcaattggaatatttaaagtgtctaatgtttctggaaaacaacgtgaattggtc
ccctccaaaactacagctggtgactctgacatggatactgataatagtgatagtgatgaa
gacagcgaagatgaagaagagggaggatctgcaacaccagttttgcagttgcgcaaggtt
gctcatagaggatgtattaatcgtatacgtgctatgacacaaaatccccatatatgtgct
tcttggtccgatgctggttatgttcagatatgggatttcagcactcatctgaatgctttg
gcagagtcagaaacagaagttccccggggagcttcttcagtttttaaccaggctccatta
tttaacttcaaagggcataaagatgaaggctatgctatagattggagtcctcgtgttgct
ggaaggctggtaactggtgactgcaagaactgtattcacttatgggagcccacatctggt
gcaacatggaatgttgatgctactccatttactggtcacactgcaagcgtagaagatcta
caatggagttccacagaagatcatgtgtttgcctcttgttctgtggatgggcatattgct
atatgggatgcacgtctggggaagtcaccagctatttatttcaaggcacataatgcagat
gtaaacgtgatttcctggaacaggctggctagtgtcatgttggcatctggaagtgatgat
ggaacattttctattcgtgatcttagattgttatcaccaaaatcgcaggaagaagataaa
tctttagtggcacattttcaataccataagcaccctatcacatccatcgagtggagtcca
catgaagcctccacattggcagtttcatcatctgacaatcaactgacaatatgggacctt
tccctggaaaaggatgaggaagaggaagcagagttcaaagctaaaacaaaagagcaggta
aatgccccagcagatttgccgcctcaacttttgtttgttcatcagggacaaaaagacttg
aaagaacttcactggcatgctcagattccaggaatgattgtgtctactgcctcagatggt
tttaacatcttgatgccttcaaacatacagagtactcttccctctgaaggtgtttga
DBGET
integrated database retrieval system
