Populus nigra (Lombardy poplar): 133693134
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Entry
133693134 CDS
T10372
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133693134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133693134
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
SR proteins
133693134
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133693134
NCBI-ProteinID:
XP_061970251
LinkDB
All DBs
Position
5:complement(8343499..8347380)
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AA seq
300 aa
AA seq
DB search
MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA
FVRYKYAEEARKAVDRLDGRVVDGREIMVQFAKYGPNAERIRSGRIVESSSKIKGRSRSR
SPRPRYRDGYKDKDRDYRRRSRSISRDRYDRDGYRGRDRDYHPRSVSHSPDHRKESGRGH
DEKRHRRSQSYGSPNSPSSPSPHRAHPRDGSPNGRNDNKRSPNGSPISPRSPSPYRAHPR
DGSPNGFNDNKRSPNGSPNSPRSPSPHRAHPRDGSPNGRNDNKRSPTSKSVSPCNESVDS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttcggccgatctggtcctccagatatcagagacaccttttctctcctcgtt
ctcaacatcactttccgaaccactgccgacgatcttttccctctctttgacaagtacggc
aaggtagtcgatgtattcataccccgcgatcggaggactggagaatcgagaggctttgcg
tttgtgaggtataaatacgctgaagaggcgcggaaggcagttgataggcttgatgggaga
gttgtggatgggagagagattatggtgcaattcgccaagtatgggcccaacgctgagcga
attcggagtgggaggatagtggaatcatcttcaaagattaaaggtaggtccagaagccgc
agccctcgtccaaggtatcgagatggctacaaggacaaggacagggattacagaaggaga
agtcgcagtataagcagggatcgttatgaccgtgatgggtatcgaggtagggatagagat
tatcatccccgaagcgtgagccacagcccagatcatcgcaaagaatctggtagaggacat
gatgagaaacgacaccgtcggagccagtcttatggaagccctaattctccaagcagccct
tctccacacagggcacatcctagggatggaagtcctaatggacgtaatgataacaaacga
tcacctaatggaagccctatttctccaaggagcccttctccatacagggcacatcctagg
gatggaagtcctaatggatttaatgataacaaacgctcacctaatggaagccctaattct
ccaaggagcccttctccacacagggcacatcctagggatggaagtcctaatggacgcaat
gataacaaacgctcacctacttcaaagagtgtctcaccttgcaatgaatcagttgattct
tga
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