Populus nigra (Lombardy poplar): 133693238
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Entry
133693238 CDS
T10372
Name
(RefSeq) PHAF1 protein At3g51130-like isoform X1
KO
K27411
phagosome assembly factor 1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133693238
Membrane trafficking [BR:
pnz04131
]
Autophagy
Other autophagy associated proteins
Others
133693238
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
133693238
NCBI-ProteinID:
XP_061970400
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All DBs
Position
5:15255206..15259303
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AA seq
404 aa
AA seq
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MLHHHHNHHQSQRPRRRCEGTAMGVIILDLRPGNGIGPFSLGMPICEAFAQIEQQPSIYD
VVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPS
NLATFVAVYALFGPTFPGNYDKDRGVYTLFYPGLSFAFPIPSQYTDCFHGREAELPLEFP
DGTTPVTCRVSIYDGSADKKVGVGSFMHKASAPPLLPGNLYMEEVHVKLGEELYFSVGGQ
HIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTLCGDYFYNYFTRGLDILF
DGQTHRIKKFVLHTNYPGHADFNSYIKCNFVIQGSDFDNSKQSITPSTKWDQVKEILGDC
GRAAIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYIATVTLFQS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttacaccaccaccacaatcaccaccagtcacagcgaccgcgacgccgctgtgaaggc
actgctatgggcgttatcattctcgatctccgcccgggtaacggcatcggtcctttctct
ctggggatgccaatatgtgaagcatttgcacagattgaacaacaacctagcatatacgac
gtcgttcatgtgaagtacttcgatgaggagccattaaaacttgatattgttatcagcttt
cctgatcatgggtttcatcttcgattcgatccgtggtcacaaaggttacgattgattgag
attttcgatgtgaaacgtcttcaaatgcgctatgctacatctcttattgggggaccatca
aatctagctacttttgttgctgtatatgcgctttttggacctacatttcctgggaattac
gacaaagatagaggcgtgtacactttgttttacccaggtttgtcatttgcttttccgatt
cccagccagtatacagattgttttcatggtagagaagcggaactgccactagagtttccc
gatggcactacgccagttacatgtcgagtctctatatatgatggttctgcggataaaaaa
gtaggtgttggatcttttatgcataaggcttctgctcctccattacttcctggtaacctg
tatatggaagaggtgcatgttaagcttggggaagaattatatttctctgttggagggcag
catattccttttggtgcatcaccacaggatgtatggacagaattaggtcgtccatgtgga
attcatcaaaagcaggttgaccaaatggtcattcactctgcttctgaccttcgcccgagg
acaaccctttgtggagactacttttacaattactttactcgtggtctggatatcttattt
gatggacagactcatagaatcaaaaagtttgttttgcacacaaactatcctggtcatgca
gattttaattcgtacatcaagtgcaattttgtcatccaaggttctgactttgacaactcc
aaacagagtattacaccaagcacaaaatgggaccaggtgaaggagatccttggggactgt
ggtcgagcagctattcaaacacagggatctacaagcaatccttttggttccacttttgta
tatggatatcagaacattgccttcgaggtgatgaagaatggttatattgcaactgtaact
ctcttccagtcgtga
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