KEGG   Populus nigra (Lombardy poplar): 133693270
Entry
133693270         CDS       T10372                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2-like
  KO
K12195  charged multivesicular body protein 6
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03250  Viral life cycle - HIV-1
pnz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    133693270
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133693270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133693270
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133693270
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    133693270
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133693270
  Exosomal proteins of other body fluids (saliva and urine)
   133693270
SSDB
Motif
Pfam: Snf7 TINF2_N IL34
Other DBs
NCBI-GeneID: 133693270
NCBI-ProteinID: XP_061970441
LinkDB
Position
5:19499821..19503465
AA seq 222 aa
MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLEAVIEAEKQAAKDLIREKRKDRALL
ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDD
VQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFENLEAQMAVQELPEVPTKVLSE
EQEQKLDLPDVPTKPPVLVDDAETASAEVSTRRKVLEEPLPA
NT seq 669 nt   +upstreamnt  +downstreamnt
atgggaaatatatttgtgaagaaaccgaagataactgatgttgatcgagccattctctcg
ctcaagactcaaagacggaagcttgcccaatatcaacaacagcttgaagctgtgattgaa
gcggaaaagcaagctgctaaagatttgattcgtgaaaagagaaaggacagggcgttgtta
gcgttgaagaagaagaaaacacaagaagaattgttgaagcaagtggacacgtggctcatt
aatgttgaacaacaattggcagatattgagctggccagcaagcagaaagctgtatttgag
agtttaaagtcaggtactgatgcaatcaaagcaatacaaagtgaggtcaacctggatgat
gttcagaagctaatggatgatactgctgaagctaaagcttatcaagatgaaattaatgct
atcttgggggagaaactatcagcagaagatgaagaggagattttagctgaatttgagaac
ttagaagctcagatggctgttcaagagttgccagaagtgcccactaaagtgctgtctgag
gaacaggagcagaagttggaccttcctgatgtaccaaccaaaccacctgttcttgtggat
gatgctgaaactgcttcagctgaggtctccaccaggagaaaagttttggaagaaccattg
ccagcatga

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