Populus nigra (Lombardy poplar): 133693445
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Entry
133693445 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133693445
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133693445
Enzymes [BR:
pnz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
133693445
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133693445
Prokaryotic type
133693445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
TetR_C_2
Motif
Other DBs
NCBI-GeneID:
133693445
NCBI-ProteinID:
XP_061970650
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All DBs
Position
5:860665..862705
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AA seq
534 aa
AA seq
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METPDSKTTTSPPQQQEPDLKRPKMSTTTSEDEDAAATTPGDDTTIKKQRYKRRKIAIFL
TYCGAGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVG
QVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALNP
CSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESNSDVSPTEIWSNDKDTT
LKSEIKEEVSGLMDNGDGDIRNSESVNETKVFQNEDRCKKSETTESGISSNSEDANANPE
IKDEIMVSIENGDDKNTKSEEEAIKGSGFCYGEKEKEKFNRILNYYLGSHNFHNFTTRTK
AEDPSAQRYIISFDAKTTVTVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESL
IQTALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIY
SHIATTEHNEGSVALWLHSLNHRNYPDLRACNNGDNITSEDNNGRESTMVENMT
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccctgattcaaaaaccacaacatcaccaccacagcaacaagaaccagacctc
aaaaggcccaagatgtccactacaacctccgaggacgaagacgccgccgccacaaccccc
ggtgacgacacaaccattaaaaagcaaagatacaagcgccgcaaaatcgcaatattcctc
acatactgcggcgctggctatcaaggtatgcagaagaacccaggtgccaaaaccatagaa
ggggacctcgaagaggccctttttcacgccggtgctgtccctgaacatgaccgtggcatc
cccaagcgctatgactgggctcgttctgctcgtactgataagggcgtgagcgctgtggga
caggttgtctcgggccggttctacatcgacccgcctggacttgtggaacgcttgcattca
aatctttctcctcagattaggattttcgggtacaagagagtgacgggttcgtttaatgct
aagaagttttgtgatcggagaaggtacgtctatttaattcctgtttttgctcttaatcct
tgctcgcatcgtgatagggagagcgtgttagctagtttagggtctggtagtgagcttgtt
aagtgtttgcagtgttcagaaagagggcgtaaggttgttggtgctgtgggtaagcgcagc
tttgaatcaaactctgatgtttccccaacagaaatttggtcaaacgataaagatactact
ctaaaatcagaaataaaagaggaggttagtggtcttatggataatggtgatggagatatt
aggaattctgaatctgttaatgaaactaaggtctttcaaaatgaagacagatgtaaaaaa
tctgaaacaactgagtcaggcatttcatcaaacagcgaagatgctaatgccaaccccgaa
attaaagatgagataatggtgtccattgagaatggtgatgataaaaatacaaaatcagaa
gaggaagcgattaagggaagtggattttgttacggagagaaggagaaagagaaattcaat
cgaatattgaattattacttggggagtcataacttccataattttaccactagaactaag
gctgaagacccctctgctcagcgctacatcatttcatttgatgccaagactacagttact
gttgaaggcattgagtttgtgaagtgtgaggttgttgggcagagcttcatgcttcatcag
atacggaagatgattggtgttgccgtggctattatgaggaactgtgcatctgagtcgttg
atacaaactgctctgcaaaagaatgtgaacatcaatgtgcctacggctcctgaggttggg
ttatacttggatgagtgctttttcacatcatataaccagaaatggaaagacagccatgaa
gaactttccatgaaagattacgaagaggaagcagaggaattcaagatgaagcacatatac
tcacacattgcgacaacagaacacaatgaaggatcagtggctctgtggttgcattctctc
aaccaccgaaactatcctgatcttcgtgcttgcaacaatggagataatatcaccagtgaa
gacaataatggcagggaaagcactatggttgaaaacatgacttag
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