Populus nigra (Lombardy poplar): 133693516
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Entry
133693516 CDS
T10372
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133693516
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
133693516
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
Methyltransf_25
FtsJ
RsmF-B_ferredox
NSUN5_fdxn-like
Motif
Other DBs
NCBI-GeneID:
133693516
NCBI-ProteinID:
XP_061970722
LinkDB
All DBs
Position
5:complement(3974209..3981311)
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AA seq
592 aa
AA seq
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MKKARDLHLLLKTIRRSSTTTTPKMDPSDRYCFSPILRWNPEVENYFIKAYGADHFSIIS
KALTRPSSYSCVRVNTLKSTSDAVIEKLLEIIKEKGFDGDCHGKEGSGPNENVGSPLEES
LKNGPIVKCQIPGLEYVLFVKGTGPHMIDYGYVPGAPPKEVIVSRKCAEAVLRGAQVFVP
GVMACSAHVEKGDTVAVSAAIEQRNPNGGWAISITRGTVLQGLQTDPYYFERNGLYIGQG
KAMMSRAGLFRASEGIAVDMNNQVFRLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERI
LDMCAAPGGKTTAIALLMKDEGELVALDRSHNKVQDIQKLAAEMSLTCITTYKLDVLKAI
RQRNEADDINTNQISNSLRFHEEKASSSTAEGFNLDKTCEDNVSNAIENGGTYVSKADIR
KAKRRMRNGPGRNQCIGGKVENSKGFYPDSFDRVLLDAPCSALGLRPRLFAGEVTIDSLK
KHATYQRRMFDQAVKLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLSLASQNPRVGG
PGLVGSFESPNGRTEEWLRPGEEEFVQRFDPSSSLDTIGFFIAKFSVGSKDV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcgagggatttgcatttgctgctgaaaactatccgcagaagctctaccact
accactcccaagatggatccatcggaccgttactgtttcagtccgattttacgatggaac
cctgaggtcgagaactactttattaaagcctacggcgccgatcatttctctatcatttct
aaagccttaacgcgtccgtcgagttattcttgtgttcgtgtaaacacactaaagtcaaca
agtgatgctgttattgagaagttgttggaaattataaaagaaaaggggtttgatggtgat
tgtcacggtaaggaaggatcaggaccaaatgaaaatgtaggcagtccactggaggaaagc
ttgaaaaatggccccattgttaagtgtcagataccaggtttagagtatgttttgtttgtt
aagggcactggaccgcacatgattgattatggttatgtacctggtgcacctccaaaggag
gtaattgtcagtagaaaatgtgccgaagctgttctccgaggtgctcaggtatttgttcct
ggtgtaatggcttgtagcgctcatgttgaaaaaggtgatacagttgcagtttcagctgct
atagagcaacgcaatcctaatggtggatgggctattagtataacacgcgggactgttcta
caaggattacaaacagatccatattattttgaaagaaatggcttgtatattggccaagga
aaagcaatgatgtcaagagctggcttattccgtgcttcagaaggaattgctgtggatatg
aataatcaagtatttagactgccttctttttatgatgtgcttgaaggagaaatatttctt
cagaacttgccaagcattgtcactgctcatgccttagatcctcaaaaaggtgaaaggata
ttggacatgtgtgcagcaccaggagggaagacaactgcaattgcactccttatgaaggat
gaaggagagttggttgcacttgataggtctcataataaggtacaggatattcagaaattg
gctgctgaaatgagcttgacttgtattacaacttataaactggatgttctcaaagctatt
cgtcaaagaaatgaagcagatgatataaacacaaatcaaatttctaactcattgaggttt
cacgaggagaaagcatcatcttctactgctgaagggtttaatctggataaaacatgcgag
gataatgttagcaatgcaatagagaatgggggaacttatgttagcaaagctgacatcagg
aaggctaagcgaagaatgcggaatggaccaggaaggaatcagtgcattggtggcaaagtt
gaaaattcaaaaggcttttaccctgatagttttgatagagttctcctcgatgctccctgc
tctgctcttggtttgagacctaggctttttgctggtgaggtaacaatagactctctaaaa
aaacacgcaacgtatcaaaggagaatgtttgaccaggctgttaaactagttcgccctggt
ggtgtgattgtgtattcaacatgtacgataaaccctggtgagaatgaagctttggttcga
tatgctttggatacatataaattcctctccttagcatcacagaatccgagagttggagga
cctggccttgttggctcttttgaatctcctaatggacgcacagaggagtggttaagaccc
ggtgaggaggaatttgttcagaggttcgatccatcgtcttccctggatacaattgggttt
ttcatagccaagttttctgttggctccaaagacgtttga
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