Populus nigra (Lombardy poplar): 133693538
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Entry
133693538 CDS
T10372
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133693538
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
eIF-3
133693538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
TRI5
Motif
Other DBs
NCBI-GeneID:
133693538
NCBI-ProteinID:
XP_061970752
LinkDB
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Position
5:complement(964241..968877)
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AA seq
909 aa
AA seq
DB search
MASRFWGQGDSESDEESDYGDEIEDGEADEPAAQTAENKYLRGTASDSDESDDQKRVVRS
AKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKMNKQLEKVMRVMESEKVPTLYIKALV
MLEDFLNQALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYEDQINIYREHPESEEEPEA
DEESEEEEESDLEFEEDPSKIVISDEEEGVNDQSEKDGGWEKMMSKKDKLMDKQFAKDPS
EITWDIVNKKFKEIVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQCDVN
PGLSGHMPIHVWKNCVQNMLVILDILVQYPNIVVDDTAEPDENETQKGADHNGPIQIWGN
LVAFLERMDIEFFKSLQCIDPHAREYIERLQDEPMFLVLAQNVQEYLERVGDLKAAAKVA
LRRVELIYYKPQEVYDAMRKLAEQTEDGGNGEEPKVEESRGSSAFVNTPELVPRKPTFPE
NSRTMMDALVSLIYKSGDERTKARAMLCDIYHHALLDEFATSRDLLLMSHLQDNIQHMDI
SSQILFNRAMAQLGLCAFRVGLITEAHGCVSELYSGGRVKELLAQGFSQSRYYEKTPEQE
RLERRRQMPYHMHINLELLESVHLSCAMLLEVPSMAANVLDDKRKVISKTFRRLLDVSER
QTFTGPPENVRDHVMAATRALRKGDFQKACDVIESLDVWKLLRNRDGVLGMLKAKIKEEA
LRTYLFSYTSSYDSLGLDQLTKMFDLSAAETKVIVSKMMINDELQASWDQPTQCIVFHDL
EHTRLQALAFQLTEKLSILAESNERAIEAKIGGGGLDLPQRRRDGQDFANLAASGVKWHE
NSSFTHGRQGSGRSGYGGGGGRPQVLGQAFGTSYSKGASNLRAGGGYSGGSRYQDAPTRM
VTLNKGARA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcgtttctggggacagggtgatagcgaatctgatgaggagagtgattatgga
gatgagattgaggatggagaagctgacgagcctgctgcccaaactgctgagaacaaatat
cttagaggaactgctagcgatagcgacgagtctgatgatcaaaagcgtgtggtaaggtca
gccaaagacaagcgttttgaggagatgtcagccactgttgatcaaatgaagaatgcaatg
aagattaatgattgggtcagcttgcaggagagctttgataagatgaataagcaacttgag
aaagtcatgagagtgatggaatcagagaaggttcccacgctttacattaaagctctggta
atgctggaagatttcttgaatcaggctttggcgaataaggaagctaaaaagaaaatgagc
agcagcaatgccaaggccttgaatgcaatgaagcagaaattgaagaaaaacaataaacaa
tatgaagatcagattaatatatatagggaacatcctgaaagcgaggaagaaccagaggct
gatgaggagtcagaagaggaggaagagtctgatttggagtttgaggaggacccttcaaag
attgtaatatccgatgaggaggagggtgtcaatgaccaatctgaaaaggatgggggctgg
gagaagatgatgagtaagaaagataagctcatggataagcagtttgcaaaagatcctagt
gaaatcacctgggatattgtaaacaagaaatttaaagaaattgttgctgcccggggtagg
aggggaactggaaggtttgagcaggttgaacagctaactttcctgacgaaagttgctaag
acccctgcacagaagttggaaattctttttagtgtggtctctgcacagtgtgatgtgaat
cctggtctcagtgggcacatgcctatacatgtctggaaaaattgtgtgcagaacatgctg
gttattcttgacattctggtacagtatcctaatattgtagtggatgacacggctgaacct
gatgagaatgaaacccagaaaggagcagaccataatgggccgattcagatttggggaaac
ttagtggcatttcttgagagaatggatattgagttctttaagagtttgcagtgcattgat
ccgcatgcacgtgagtacattgagagactgcaggatgaacctatgtttttagttcttgct
cagaatgtccaagaatatctagagcgtgttggagatcttaaagctgcagcaaaggttgcc
ttaagacgtgttgagctgatctattacaaaccacaagaggtttatgatgctatgagaaag
ttggctgaacagacagaagatggaggcaatggtgaggagcctaaggttgaggaaagtagg
ggttcctctgcatttgttaatactccagagcttgtgcctcgaaagcctacctttcctgag
aatagcaggacaatgatggatgctttagtctccctcatttacaagtctggagatgagcgg
accaaagctcgtgcaatgctctgtgatatctaccaccatgctctcctggatgagttcgca
acctcccgtgacctgctattgatgagtcacctgcaagataatattcagcacatggacatt
tcaagccagatacttttcaacagggctatggcacaacttggtttatgtgcattccgtgtt
ggtctaatcactgaagcacatggatgtgtttctgaattatattctggtggaagggtgaag
gagttgcttgcacaaggtttttcacaaagccgatattatgaaaaaactccagaacaggaa
agactggaaaggagacgccagatgccatatcatatgcacataaatcttgaacttctggag
tctgtccatctcagttgtgcaatgctgctggaggtccccagcatggcagccaatgttctt
gatgataagcgcaaggtcattagcaagacatttaggcggctgcttgatgtaagtgagagg
caaactttcactggtcctcctgaaaatgtaagggaccatgtaatggctgctacacgggca
cttaggaaaggagatttccagaaggcatgtgatgttattgagtctcttgatgtctggaag
ctcctcagaaatagagatggtgttcttgggatgcttaaagccaagattaaggaagaagct
ctgaggacctacctgttttcgtacacctcctcctatgattcgcttggcttggaccagttg
accaaaatgtttgacctttcagcagctgagactaaagtcattgtcagtaaaatgatgatc
aatgacgagctccaagcaagctgggaccagccaacacaatgtattgtattccatgatctt
gagcacacaaggttgcaggctttggcgttccagttgacagagaagctttcaatccttgct
gaaagtaatgaaagggcaatagaagcaaaaattggtggtggtggtttggatctgcctcag
agacggagggatggccaggattttgctaacctggctgcttcaggtgttaagtggcatgaa
aactcatctttcactcatggaaggcaaggttctggacgttccggatatggtggtggtggt
gggaggccacaggttttaggccaggctttcgggactagctattcgaagggggcaagcaat
ttgcgagctggaggtggatattctggaggctctcgatatcaagatgctccaactcgcatg
gttactcttaataagggagctcgtgcttga
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