Populus nigra (Lombardy poplar): 133693560
Help
Entry
133693560 CDS
T10372
Name
(RefSeq) rac-like GTP-binding protein RHO1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04145
Phagosome
pnz04148
Efferocytosis
pnz04620
Toll-like receptor signaling pathway
pnz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133693560
04148 Efferocytosis
133693560
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133693560
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133693560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133693560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133693560
04031 GTP-binding proteins [BR:
pnz04031
]
133693560
Membrane trafficking [BR:
pnz04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
133693560
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
133693560
Macropinocytosis
Ras GTPases
133693560
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
133693560
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133693560
Exosomal proteins of other body fluids (saliva and urine)
133693560
Exosomal proteins of colorectal cancer cells
133693560
Exosomal proteins of bladder cancer cells
133693560
GTP-binding proteins [BR:
pnz04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
133693560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
133693560
NCBI-ProteinID:
XP_061970778
LinkDB
All DBs
Position
5:15761966..15765008
Genome browser
AA seq
197 aa
AA seq
DB search
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLQP
PKQKKKKSKAQKACSIL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcaaggtttataaagtgtgtgacggtaggagacggagctgttggtaaaact
tgtctcttgatttcatacaccagcaacaccttccctacggattatgtgccaacggttttt
gacaatttcagtgcaaatgtggtcgtcaatggtgctactgttaacctggggttgtgggat
acagctgggcaagaggattataatagattaagaccattgagttatcgtggggcagatgtt
ttcatactggcattctctctcattagcaaggccagttacgaaaatgtttctaagaagtgg
attccagagttgaagcattatgcacctggtgtcccaatagttcttgttggaacaaaactt
gatcttcgggatgataagcagttcttcatcgaccaccccggtgctgtgcctattactaca
gctcagggagaggagctgaggaagctgattggtgcacctgcttatattgaatgcagttca
aaaacgcagcagaatgtgaaggcagttttcgacgcagccatcagagtcgtccttcaacct
cccaagcaaaagaaaaagaagagcaaagcacaaaaggcctgttctatattgtga
DBGET
integrated database retrieval system