Populus nigra (Lombardy poplar): 133694140
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Entry
133694140 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133694140
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03060
Protein export
pnz04141
Protein processing in endoplasmic reticulum
pnz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
133694140
04141 Protein processing in endoplasmic reticulum
133694140
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133694140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133694140
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnz02044
]
133694140
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
133694140
Secretion system [BR:
pnz02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
133694140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
133694140
NCBI-ProteinID:
XP_061971580
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Position
1:complement(9555810..9561827)
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AA seq
476 aa
AA seq
DB search
MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFVPVGGLAYYITAPSSLADMAANP
FHALFYFVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIP
TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggggggtggatttagggtgcttcaccttgtcagaccatttctctcatttcttcccgaa
gttcagagtgctgacagaaaaatcccgtttcgtgagaaggtcatatacactgtgattgct
cttttcattttcttagtatgcagtcaactcccgttgtatggcattcattcaacaaccggt
gcggatcctttctattggatgcgtgtcattcttgcttcgaaccgtggtactgtcatggaa
cttggtatcactccaattgtgacttctggactagtgatgcaactgcttgctggttcaaag
atcattgaagtggacaacaacgtgcgtgaagatcgtgcattattgaacggtgcacagaag
ttattgggtatcttgattgctgttggtgaagcggtggcgtatgtgctctcagggatgtat
ggaagtgttggccaacttggagtaggaaatgccattcttataatcattcagctttgtttt
gccgggatcattgtgatctgtttggacgaacttctccagaaaggatatggtctgggctct
ggaatttctcttttcattgcaaccaatatctgtgaaaatattatctggaaagcatttagt
ccaaccaccattaatagtgggcgaggtgctgaatttgaaggagctgtcattgctttattc
catcttctgataactcgaacggacaaagttcgtgctctccgagaagcattttaccggcag
aatcttccaaatgtgacaaatctgcttgctacagtgctaatctttctcattgtcatctac
ttccaagggttccgtgtggttttgcctgtgaggtcaaagaatgctcgtggacagcagggt
tcatatccaatcaagttgttctacacctcaaacatgcccattattttgcagtctgctctt
gtatctaacctttacttcatctctcagttgctgtacaggaggtacagtggaaacttcctc
gtgaatcttttgggcaaatggaaggaatctgaatattcaggtggtcagtttgtccctgtt
ggtggccttgcatattatatcactgcgccctcaagcttagctgatatggcagcaaatcct
ttccatgcacttttctatttcgtgtttatgttgtcagcatgtgccctcttctcaaaaact
tggattgaagtgtctggatcatctgccaaagacgtggctaagcagctcaaggagcaacaa
atggttatgcctgggcatcgggagtccaacttacaaaaagagttgaaccgttacataccc
actgctgcagcttttggaggtatttgcattggggcactgacagtgttggcagatttcatg
ggagctatcggatcagggacaggaatactacttgcagttacgatcatttatcagtacttt
gagacctttgaaaaggagaaggctagtgaacttggtttctttggtttctaa
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