Populus nigra (Lombardy poplar): 133694427
Help
Entry
133694427 CDS
T10372
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133694427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133694427
03041 Spliceosome [BR:
pnz03041
]
133694427
03032 DNA replication proteins [BR:
pnz03032
]
133694427
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133694427
Spliceosome [BR:
pnz03041
]
Complex A
U1 snRNP components
Sm proteins
133694427
U2 snRNP components
133694427
Complex B
U1 snRNP components
133694427
U4/U6.U5 tri-snRNP components
133694427
Complex C
U2 snRNP components
133694427
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133694427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
133694427
NCBI-ProteinID:
XP_061971912
LinkDB
All DBs
Position
5:complement(553000..554900)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGGMVECEDNWNCQLESITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASLGVGRGRSVAMRSKAQAAGRGA
PPGRGVVPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagcttggggattccggtgaagctactacacgaggcttccggtcacatagtg
acggtggagctgaagagtggagagctttatagaggaggcatggtagagtgtgaggataac
tggaactgccagctcgagagcatcacttacactgctaaggatgggaaggtctcacagctt
gagcatgttttcattcgtggcagtaaagtcagattcatggttatacctgatatgctaaaa
aatgctcccatgttcaagcgtttggatgctagaatcaagggtaagagtgcatcgcttggg
gttggcaggggaagatctgttgcaatgcggtctaaagcccaagctgctgggcgtggagca
cccccaggcaggggcgttgtaccacctgtcaggaggtaa
DBGET
integrated database retrieval system
