KEGG   Populus nigra (Lombardy poplar): 133694452
Entry
133694452         CDS       T10372                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03083  Polycomb repressive complex
pnz04120  Ubiquitin mediated proteolysis
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133694452
   04120 Ubiquitin mediated proteolysis
    133694452
  09126 Chromosome
   03083 Polycomb repressive complex
    133694452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133694452
   04121 Ubiquitin system [BR:pnz04121]
    133694452
   03036 Chromosome and associated proteins [BR:pnz03036]
    133694452
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133694452
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133694452
   Cul7 complex
     133694452
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133694452
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133694452
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 133694452
NCBI-ProteinID: XP_061971943
LinkDB
Position
5:15821305..15825305
AA seq 158 aa
MSSGRKISLRSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC
KKHVETPKSEDRGTNSGDDELKNWDTEFVRVDQATLFDLILAANYLNIKGLLDLTCQTVA
DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 477 nt   +upstreamnt  +downstreamnt
atgtcgtctggaaggaagatatcactcaggagcagcgacggcgagtcgttcgaagtcgac
gaggccgtagctttagagtcacagactattaagcacatgatagaagacgattgcgccgat
aacggaattccgttgccgaacgtaacaagcaagatcttagcgaaagttatcgagtactgc
aagaaacacgttgagactccgaaatccgaggatcgaggaactaacagcggcgatgatgag
cttaagaattgggatactgagtttgttagagttgatcaggctacactttttgatcttatt
ttggcagccaactatctgaacatcaagggcttgctggacctgacatgccagactgttgca
gacatgatcaagggaaagactccagaggaaatcaggaagacctttaacatcaagaatgac
tttacacctgaggaggaggaggaagttcgccgtgagaaccagtgggcatttgaatga

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