Populus nigra (Lombardy poplar): 133694459
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Entry
133694459 CDS
T10372
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133694459
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Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
133694459
NCBI-ProteinID:
XP_061971952
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Position
5:8473372..8477657
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AA seq
681 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLRSLGTSLVTKRSTDSVSTLLEVVKSTGATQLLFNHLYDPLSLVRDHRAKEILT
AQGITVRSFNADLLYEPWDVNDAQGRPFTTFDTFWERCLSMPFDPEAPLLPPKRIISGDV
SRCPSVTLVFEDESEKGSNALLARAWSPGWSNADRALTTFINGPLIEYSMNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNRAGEESVNLFIKSIGLREYSRYLSFNH
PCTHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWAAGWLHDRIRVVVAS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLEEA
LSEMWQQEAASRAAIENGTEEGLGDSSESAPIAFPEDIHMEENHEPVRNNPPATNRRYED
QMVPSMASSFLRIEDEETSSDVHNSTGDGRAEVPRDVNVNQEPRRDALNQGFVQTVRNNT
ALSPFNISRGLTNVEDSTAESSSSSRRERDGGIVPVWSPPTSSYSEQFVGDDNGIGATSS
YLQRHPQSHQIINWRRLSQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggtgggtgtagtatagtttggttcaggagagatctaagggtagaagataac
ccggcacttgcagctggtgtaagagcaggtgctgttgttgctgtgtttgtatgggcaccc
gaggaggaaggccattattatcccggtagggtctcaaggtggtggcttaaacaaagtttg
gctcatcttgactcttccttaaggagtcttggtacttctcttgttactaagagatcaact
gatagtgtttctactcttcttgaggttgtcaaatctaccggtgctactcagcttttattc
aaccacttatatgaccccctgtcactggttagggatcaccgggcaaaggagattttgact
gctcaaggtattactgtaagatcttttaacgcggacttgctttatgaaccatgggatgtt
aatgatgcccaaggccgtccgttcacaacctttgacactttctgggaaagatgcctcagc
atgccttttgatccagaggctccacttctcccgcctaagaggattatttcgggtgatgta
tccagatgcccttcagtcacgctggtatttgaagatgaatcagagaaaggaagcaatgca
cttcttgcaagagcatggtcacctggatggagcaatgctgatagggctttgaccactttc
attaacggaccactaattgagtactctatgaatcgtagaaaggctgatagcgccacaacc
tcatttctctcaccacacttgcattttggggaggtgagtgtgagaaaagtcttccatctt
gttcgcatcaagcaggttctgtgggcaaatgaagggaacagggccggcgaagagagtgta
aacttgtttataaagtcaattggtcttagggaatattcaagatacttgagtttcaaccat
ccttgcactcatgaaaggcctcttcttgggcaccttaagtttttcccttgggttgtggac
gaaggctattttaaggcatggagacaaggtagaacaggttatccattagttgacgctgga
atgagagaattgtgggctgctggttggctgcatgatcgtatacgtgtggtagttgctagt
ttctttgtgaaggttctacaacttccatggagatggggaatgaagtatttttgggatacc
ctattggatgcagatttagagagcgatgctcttgggtggcaatacataaccggcactctc
ccagacagccgtgagtttgatcgcatagataatccacagtttgagggttacaaatttgac
ccgaatggagaatatgtacgccggtggcttcctgaacttgctaggctaccaactgaatgg
attcaccacccatggaatgcacctgaatctgtactccaagctgctggaattgagctggga
tcaaattaccctctccctattgtagggatagatgcagcaaaggtcaggttggaagaagca
ctttcagaaatgtggcagcaagaagctgcttcaagagctgcaattgagaatggaacagag
gaagggcttggagactcctctgaatcagccccaattgccttccccgaagacatacatatg
gaggaaaaccatgagcctgtgagaaacaatcctcctgctacaaatcgtcgctatgaggat
cagatggtcccaagcatggcatcttcctttctgagaattgaagacgaagaaacttcttct
gatgtacacaattctacaggagatggcagagcagaggtgccaagagatgtaaatgtgaat
caagaaccaagaagagacgctttgaaccaggggtttgttcaaactgttcgtaataacact
gctttgtcaccatttaatatttcgagaggtctgacaaatgttgaagactcgaccgcagag
tcttcaagtagtagtaggagagagagggatggaggtatagttccagtttggtcccctcca
acttctagttactcagagcagtttgttggtgatgacaatggaattggagcaacttcttct
tacttgcagaggcatccacaatctcaccagataatcaattggaggcggctatctcaaact
gggtaa
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