Populus nigra (Lombardy poplar): 133694483
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Entry
133694483 CDS
T10372
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133694483
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133694483
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133694483
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133694483
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133694483
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
133694483
NCBI-ProteinID:
XP_061971994
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All DBs
Position
5:9582831..9589866
Genome browser
AA seq
1126 aa
AA seq
DB search
MHVEGDLGFSSLVVLVFCVVIIPLGCFIIRCKWRGAVARKEEIKRLLVLAAEEAARAEFE
AAASYGTVPVLTNNYQCAVCFCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECHPPTTT
YHINDDGGNPGQRAAKGDRHDIYDGRYENRPVDTFSVEPVVSDSNYSPGVSFVKDDDIKV
DSVLDTEGTDSVFESSGTSFSGFSTPTGSSFSEFSAHSGGESSDNVSVSESIGSNETEGS
DGQMPADTAPDTLESSLNKVDVTKPLSPKFATLVDSVDSFNKLSKSNQSKPHGNDGESQC
SSSSSGHSISARNGDSITKPAKVSSGFWGRTLDSAVSSSDTMDRSAMSNLTGPVNSKPSN
DESFLHFKFHLSGSDAPTQHAKSTRVNDIIPDDALPSASDRALSSEKNGVDAQKVKNSTS
ISCERSSHIDVNSRGDLNVSSERKSVSSSSSYGHVSSSSGGVKLDTGASKVCRSQSSISK
RSDIVVNDPVGALHLSKSRSSSNALQTHLTSTIGGHSVSSVQYGNVELGTASSSQMASYS
PSSINGLKSSVWKVVDQFRGPKCGRYSKKGLFPYDLFVKLYNSSKVEMRPCGLINCGNSC
YANAVLQCLAFTPPLTSFFVQGLHSKACLNRECCFSCEFESIILKAKEGKSPLSPLGILS
QLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEAGVNAMDSFAEETTLIGLTFGGYLH
SKIKCMKCHYKSERQERMMDLTVEIEGDIGKLEDALRRFTSAEILDGDNKYQCGRCKSYE
KAKKKMTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYMSGTSDKSPIYRLYG
VIVHLDVMNAAFSGHYVCYVKNIQNRWFKIDDSTVTAVELERVLSKGAYMLLYARCSPRA
PRSIRSRIISSDPKNKCNTSKINATNTALDSRSTSMQSSAFQLHPDSIPPDNLASVESFY
MKFHRLQRILEEDSSSDNFSFTSGNSDEGSCSTDSTHDSTSTDDLSDYIFGGWNSWQNTS
DSDTSSSSPPLYSRQSPHGEMNQHGSYADSGVGGSDLWDRVPSESSKLVYLEGKGGTFLH
SDTAKQGRKLASSSSSYDSTKLGSVNPLNGVKSGVSFRRTASERTD
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgagggggatctagggttttcgagcctggtggtccttgttttctgtgtagtg
attattccgctgggctgttttataattaggtgtaaatggcgaggtgcggttgcgagaaag
gaggagatcaagaggctgttggttttggcagcggaggaagccgctagggctgagtttgag
gccgcggcttcatacggcaccgttccggtgttgacaaataactatcaatgtgctgtttgt
ttttgcccgacaacgacacggtgtgcccgctgtaaagctgttagatattgttctggcaag
tgtcaaattatccactggcgacaaggtcacaaggaagaatgccatcctcctaccactaca
tatcacattaacgatgacggaggtaatcctggccagagggctgcaaagggagaccgacat
gatatttatgatggcagatatgagaatagaccagttgatacattctctgtggagcctgta
gtgtctgattccaattactctcctggagtttcatttgtaaaggatgatgatattaaagtt
gattctgttttagatacagaaggaacagattccgtttttgaatcatcaggcacctcattt
tctggattttctactcctactggctcttcgttttctgaattctctgctcattcaggtggt
gaatcatctgataatgtctctgtaagtgagagcatcggttcaaatgaaactgagggatca
gatggacaaatgccagctgatactgctcctgacacactggagtccagtttgaacaaggta
gatgtgaccaagccattgtctccaaagtttgctactttggttgattctgtagatagtttt
aataaattgagtaaatcaaatcagagtaaacctcacggaaatgatggggagagccagtgc
tcatctagctcttcaggtcatagcatcagtgccaggaatggtgattcaatcacaaagcca
gctaaagtttcttctggcttctggggtagaaccctggattctgccgtgtccagcagtgat
accatggacagatctgctatgtcgaatttaactggccctgttaacagcaagccatcaaat
gatgaatcattcctacatttcaagttccatctatctggaagtgatgctcctacccagcat
gcaaaaagcacaagggtgaatgacatcataccagatgatgcactcccttccgcttctgat
agagctctttcatcagaaaagaatggtgttgatgctcaaaaagtcaagaactccacatcc
ataagctgtgaaaggtccagtcatattgatgttaactctcgtggtgatttgaatgtttcc
agtgagcgtaaatctgtatcatcatcgtcttcttatggtcatgtttcttccagttctgga
ggagttaaattagatacaggtgcttcaaaagtatgcagatctcaatcctcgatatctaaa
agatcagatattgttgttaatgaccctgttggtgctttacatctatccaagtccagatca
tcatctaatgctttgcagacccatttgacttctaccattggtgggcactcagtttcaagt
gtgcaatatggaaatgttgaactgggtactgcaagttcctcgcaaatggcaagctattct
cctagttctattaatggattgaagtcatcagtgtggaaagttgttgaccaattcagagga
cctaaatgtggaagatatagtaaaaagggccttttcccatatgatttatttgtaaagtta
tacaattcgagtaaggtggaaatgcgaccatgtggtcttatcaactgtggaaacagctgc
tatgctaatgctgttctacaatgcttggcatttactcctcctttgacttcgttttttgtg
caaggactccattccaaagcatgtttaaatagagaatgttgcttctcttgtgagtttgaa
agtataattttgaaggcaaaggaagggaaatctccactttctccccttggcattctatcc
caactacagaatatcgggagtcagcttggtaatgggagagaagaagatgcacatgaattc
ctaaggtatgcaattgatgcaatgcaatctgtttgccttaaggaagctggggtaaatgca
atggactcctttgcagaagaaaccactctcataggccttacatttggaggctaccttcac
tcaaagataaaatgcatgaagtgccattacaagtcagagcggcaagaaagaatgatggat
cttactgttgaaatagagggggatatagggaagcttgaagatgcactaagacgattcacg
agtgctgagattctggatggagacaacaagtaccaatgtggcagatgcaaatcttatgag
aaggctaagaaaaaaatgacaatattggaggctcccaatgtccttacaattgcattgaag
cgctttcagtctggtaaatttggaaagctcaataaatctatccggttcccagagatcctg
gacttagcaccatatatgagtggaactagtgataaatcacccatatacaggctttatggg
gtgattgttcacttggatgtcatgaatgctgcattttctggtcactatgtgtgctacgtc
aaaaacatccagaacaggtggttcaaaattgatgacagcacagttacagctgtggaactt
gaaagggttttatcaaaaggcgcctacatgcttctttatgcaaggtgctcaccaagggcc
ccaagatcgataaggagcagaataatatcttctgatcctaaaaataaatgcaacacctcc
aaaatcaatgcaacaaacactgcattggattcaagatccacatccatgcaatcaagcgct
ttccaattgcatcccgattcaattcctccagataatttggccagtgttgaatctttctat
atgaagttccaccggcttcagaggattttagaagaggactcatcaagtgacaatttctct
tttactagtggcaactcagatgaaggttcgtgcagtactgacagcacccatgattctaca
agtactgatgacctttctgattacatttttggaggttggaactcttggcagaatacatct
gattcggatacttcttcatcttcccccccattgtactcaaggcaatcacctcatggtgag
atgaaccagcatggttcatatgcagattcaggggttgggggttctgatctttgggacagg
gtacccagtgagagcagcaagctggtgtatttggaaggtaagggaggaacttttttgcat
tctgacacggctaaacaaggtagaaagttagctagtagtagtagtagttatgactcaaca
aaattaggatcagttaaccctttaaatggtgtaaaatccggggtatcctttagaagaaca
gcgagcgaaagaacagattga
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