Populus nigra (Lombardy poplar): 133694615
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Entry
133694615 CDS
T10372
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133694615
Transcription factors [BR:
pnz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
133694615
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
DUF5733
DICT
Stn1_C
Motif
Other DBs
NCBI-GeneID:
133694615
NCBI-ProteinID:
XP_061972190
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Position
1:complement(16693116..16705533)
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AA seq
208 aa
AA seq
DB search
MVRGKVQLQRIEDKSSRQVCFSKRKRGLLKKAKELSVLCDVEMAVIIFSSTGKLFEFCSG
NSLRNILERYDTHKTKSQEIAICKNVDKTKQNHHAEYMGPSYMDANPLQMVQRYFEGKNI
EQLNITQLIQLERELDSTLVYTRGRKTEAMMKSVTALHQKEQDLTDENNLIEREISAIIN
NGNLASQHGRVVEDPDCVHPSPLDLFHF
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagggaaggtgcagttacaacgaatcgaagacaaaagcagccgtcaagtgtgt
ttctcaaagagaaagagaggtttattaaagaaagctaaagaactatcggttctgtgtgat
gttgagatggcggtcatcatcttctcctccactggcaagctcttcgagttttgcagtggc
aacagtttgagaaatatccttgagcgctatgacacacataaaactaaaagtcaagaaata
gcaatctgcaagaacgttgataaaaccaagcagaatcatcacgcagaatacatgggtccc
agctatatggatgctaacccactccaaatggtccaaaggtactttgaagggaagaacata
gaacagctaaatataactcaactcattcagctagaaagagaactggactcaacactagtt
tacaccagaggaagaaagacagaagcaatgatgaagtccgtaacagccctccatcagaag
gaacaagatctgacagatgaaaataatctcatagaaagagagatatctgcaatcatcaac
aatggcaacctcgccagccagcatggccgtgttgtagaagatccggattgtgttcatcct
tctccactggacttgtttcacttttag
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