Populus nigra (Lombardy poplar): 133694667
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Entry
133694667 CDS
T10372
Name
(RefSeq) N-glycosylase/DNA lyase OGG1-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03410
Base excision repair
Brite
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133694667
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133694667
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133694667
NCBI-ProteinID:
XP_061972278
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Position
5:6249419..6257542
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AA seq
378 aa
AA seq
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MKRARPTPPPATPTTSRSSPIPPLPTPPQPRHSSKKHQKIIFQPTNWAPVNLTQSELSLP
LTFPTGQTFRWKQTGPLQYTGSLGRHLISLKHHKNGDVYYQIHHSPSQSAAKSALLSFLN
TNISLTEMWHGFAAADSRFAELAQHFKGARVLRQDPLECLIQFLCSSNNNISRITKMVDF
VSSLGDHLGNVEGFEFHAFPSLERLALVTEQQLREAGFGYRAKYVTGTVNALQSKPEGGV
KWLESLRKLQLQMVIDSLCTLPGIGLKVASCIALFSLDQHHAIPVDTHVWRIATTHLVPE
LAGASLTPKLCGRVADAFVTKYGKYAGWAQTLLFIAELPSQKALLPSVTVNEKKSSKKRG
SKAQRGLSSTEEGGQQAD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagccagacccacgccgccacccgccacccccaccaccagcagatcatcacca
ataccacctctaccaacaccaccacaaccccgccactcctccaaaaaacaccaaaaaata
attttccagccaacaaactgggccccagtcaacctgacccagtcagaactctcactccca
ctcacattccccaccggccaaaccttccgttggaaacaaaccggtcctctccaatacaca
ggcagtctcggtcgtcacttaatctcccttaagcaccataaaaacggcgacgtttattac
caaatccaccattccccctcccaatccgctgccaaatcagctctcctcagtttcctcaac
accaacatctcactaaccgaaatgtggcacgggttcgccgccgctgattcgcggttcgct
gaattggcacagcattttaaaggagctagggttttgaggcaggatccacttgagtgcttg
attcaatttttatgctcttcgaataataacatttcgaggatcactaaaatggtggatttc
gtgtcctcattaggtgatcatttggggaatgttgagggttttgagttccacgcgtttcct
tccctggagagattggctttggttacggagcagcagctaagagaggctggttttggttat
agagctaaatacgttactggaacggtgaatgctttgcaatcgaaaccggaaggaggtgtg
aaatggcttgaatctcttcgaaaattacaactccaaatggtgattgattcactttgtaca
ttacctggaattggtttaaaggtggcatcctgtattgctctgttttctctcgatcaacat
catgccatccctgttgatacgcacgtgtggcggattgctacgacacaccttgtacctgag
cttgctggtgctagcctgacacctaagctctgcggccgtgtggcagatgcgtttgtgact
aagtatgggaaatatgctggatgggctcagacattacttttcattgctgaattgccctcg
cagaaggcccttctaccatcagtgactgtcaatgaaaagaaatcctctaagaaaagaggc
agcaaagcacaacgtggcctaagcagcactgaggaaggaggccagcaagcagattga
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