Populus nigra (Lombardy poplar): 133694732
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Entry
133694732 CDS
T10372
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133694732
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
Helicases
133694732
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GFIT
Other DBs
NCBI-GeneID:
133694732
NCBI-ProteinID:
XP_061972394
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Position
5:5598321..5603416
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AA seq
786 aa
AA seq
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MGKEPLVSSMAELKRKQQVKKKSKSCGFESLNLSPNVYRGIKRKGYRVPTPIQRKTMPLI
LAGIDVVAMARTGSGKTAAFLLPMLEKLKQHVPQSGVRALILSPTRDLALQTLKFTKELG
RFTDLRISLLVGGDRMESQFEDLSQNPDIIIATPGRLMHHLSEIDDMSLKTVEYVVFDEA
DSLFGMGFAEQLHKILTQLSENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDVDTKISP
DLKTVFFTLRQEEKYAALIYLIRDHISTDQQTLIFVSTKHHVEFLNVLFREEGIEPSVCY
GDMDQDARKIHVSRFRARKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRV
ARAGRTGTAFSFVTSEDMPYLLDLHLFLSKPVKAAPTEEEVLQDIDGVMNKIDQAFANGE
TVYGRFPQTVLDLVSDRVREIIDSSAELTSLQKACTNAFRLYTKTKPSPAKESIKRVKDL
PCEGLHPIFKNVLEGGELMALAFSERLKTFRPKQTILEAEGESAKSKNLQGPGQWVDVMK
RKRAIHEEVINLVQQQRSNKLADKLEVETEITSDEKEKKVVRGSKRKAKSFKDEEYFISS
IPTDHHTEAGLSMRGNDGFGSNRLENAVLDLVADDSGGLQKQKTVYHWDKRNKKYIKLNN
GDRVTASGKIKTESGAKVKATKTGIYKKWKEGSHRKISLRGTNNDGNAEESTSFSGNRQL
RGNNRNFRGSKKQHSLPNANVRSEIKDLEQVRKERQKKADRVSYMKSKGSKSKKFGKNGK
RGKPRK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaacccttagtcagctccatggcagagctaaaacgcaaacaacaagtcaaa
aagaaatcaaaatcctgtggcttcgaatcccttaacctaagccccaatgtctatcgagga
atcaagcgtaagggttatcgtgtccccacccctatccaacgtaagaccatgcctcttatc
ctcgccggcatcgacgtcgtcgctatggcccgcactggatccggcaagaccgccgccttt
ctcctccccatgttagagaagttaaaacagcacgtgcctcaaagtggtgttagagctctc
atactgtcgcctactagggatttggcgttgcagactttgaaattcactaaagaacttggc
agattcactgatcttagaattagtttattggttggtggagatcgtatggagagtcaattt
gaggatttatcgcaaaaccctgatattattattgccactcctggtagattaatgcaccat
ttgtctgagattgatgacatgtcgttgaaaacggttgaatatgttgtttttgatgaagcc
gatagtctcttcggtatgggttttgctgagcagttgcataaaattcttacccagctgagc
gagaatcgtcagactttgctttttagtgcaactttgcccagtgcacttgcggagtttgcc
aaggcaggtttaagagatcctcagcttgttcggcttgatgtggatactaagattagtcct
gatttgaaaactgtgttttttaccttgcgccaagaggaaaaatatgcagcgttgatttat
ttgataagagatcatattagtaccgatcaacaaacattgatatttgtttctacaaaacat
catgtcgagtttctaaatgttctgtttagagaagagggcattgagccttcggtttgttat
ggtgatatggatcaagatgctcgtaagattcatgtatcgaggttcagggcacgtaagact
atgttgttgattgtgacagatgttgcagctaggggcattgatattccgttgcttgataat
gtgataaattgggacttccctccaaaacctaagatttttgttcatcgtgtggggagagtt
gctagggcaggtcggactggaacagccttttctttcgtgacatctgaagatatgccttac
cttttagatcttcatctgtttctctcaaagccagtcaaggctgctcccactgaggaggag
gttttgcaggatatagatggagtaatgaacaaaattgatcaagcatttgcaaatggagag
actgtttatgggcgtttcccccagactgtccttgatcttgtgtcagacagagttcgcgaa
atcattgattcatcagctgaactaacttctttacagaaagcctgtacaaatgcttttcgt
ttgtatacaaagaccaaaccatcacctgcgaaggagtccattaaaagagtgaaggattta
ccttgtgaaggattacacccaatattcaaaaatgttttggaaggtggtgaattaatggca
cttgccttttctgagcgtttgaaaactttcagacccaagcagactatattggaagctgaa
ggtgaatcagccaagtcaaagaatctgcagggtcctggtcagtgggttgatgtcatgaag
agaaaaagagctattcatgaggaggtcattaatttggtacagcagcagcgctctaacaag
ctggcagacaagctggaagttgaaactgaaattacttcagatgaaaaggagaaaaaagtg
gttcgtggttctaaaagaaaggcaaagagtttcaaggatgaggaatacttcattagttca
ataccaactgatcatcatacagaggcaggtctctcaatgagaggaaatgatggctttgga
tcaaataggttggaaaatgctgtgttggatcttgttgcagatgatagtggggggttacag
aaacagaaaaccgtataccactgggataagaggaataaaaagtacatcaaactaaacaat
ggtgatcgtgttacagccagtggaaagataaagacagaaagtggtgctaaagtaaaagca
accaagactgggatatacaagaagtggaaagaagggtcacacaggaaaatatctcttaga
ggaacaaataacgatgggaatgctgaggaatccacaagcttctcaggaaaccgccaatta
cgagggaataacaggaacttcagagggagcaaaaagcagcactctctgcctaatgctaat
gtgcgttcagaaattaaagatcttgaacaagttcggaaggagaggcagaagaaggcagac
agagtttcttatatgaagagcaaaggttcaaagagtaaaaagtttggaaaaaatggaaaa
aggggcaaacctaggaagtaa
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