Populus nigra (Lombardy poplar): 133694954
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Entry
133694954 CDS
T10372
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133694954
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133694954
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133694954
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133694954
03041 Spliceosome [BR:
pnz03041
]
133694954
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133694954
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
133694954
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133694954
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133694954
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133694954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
133694954
NCBI-ProteinID:
XP_061972635
LinkDB
All DBs
Position
5:complement(22387453..22390647)
Genome browser
AA seq
321 aa
AA seq
DB search
MMMMTMEGMMDKAVLDDIIRRLLEGKGGKQVQLSEGEIRQLCVNARQIFLSQPILLEIKA
PIRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGRQSLETICLLLAYKIRYPDK
IYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLS
PELEHLGQIKEIQRPTEIPDCGLLCDLLWSDPDARVEGWADSDRGVSCTFGPDKVAEFLN
KNDLDLICRGHQVVEDGYEFFSKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILK
PILPASSSKLTLKKPPKARKI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgacgatggaagggatgatggataaggcagtattggatgatataataagg
aggttgttagaagggaaaggaggaaagcaagtgcagttatctgaaggagagatccgtcaa
ttatgtgttaatgctcgccaaatcttcctttctcagcctattctcctcgagattaaagct
cccattcgcatctgtggtgacatacatgggcaatatcaagacctcctgaggctgtttgaa
tatggtggctaccctccttcagcaaactatctcttccttggggattatgttgatagaggg
aggcaaagtttggagaccatatgtctgcttctggcctacaaaatcagatatcccgacaaa
atttacctcttgagaggtaaccatgaggatgcgaagatcaacaggatatatgggttttat
gacgagtgtaaacggagatttaatgttaggctatggaaaatatttaccgactgcttcaat
tgtttgcctgttgccgcactgattgatgagaagatactttgcatgcacggaggcctctct
ccagagttggaacatttgggtcagataaaggaaattcaaagacctactgaaatccctgat
tgtggtctcctttgtgatctgctttggtctgatcctgatgctagggttgagggttgggct
gatagtgatcgaggtgtttcatgtacctttggacctgataaagttgctgagtttttgaat
aaaaacgacttggatctcatttgccgaggtcatcaggtggtggaggatggatacgagttt
ttttccaaacgaagattagtaacaatattctcagctccaaactatggtggggagtttgac
aatgcaggtgctctcctaagtgttgatgaatctttagtgtgttcctttgagatattaaag
ccaattctaccagcaagcagttcaaagttgacccttaagaagcctcctaaagccagaaag
atctag
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