KEGG   Populus nigra (Lombardy poplar): 133695037
Entry
133695037         CDS       T10372                                 
Name
(RefSeq) SKP1-like protein 14
  KO
K03094  S-phase kinase-associated protein 1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03083  Polycomb repressive complex
pnz04120  Ubiquitin mediated proteolysis
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133695037
   04120 Ubiquitin mediated proteolysis
    133695037
  09126 Chromosome
   03083 Polycomb repressive complex
    133695037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133695037
   04121 Ubiquitin system [BR:pnz04121]
    133695037
   03036 Chromosome and associated proteins [BR:pnz03036]
    133695037
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133695037
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133695037
   Cul7 complex
     133695037
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133695037
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133695037
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF1108 CobS_N
Other DBs
NCBI-GeneID: 133695037
NCBI-ProteinID: XP_061972767
LinkDB
Position
5:complement(17220424..17221289)
AA seq 184 aa
MSSSTDSPTLTTETTQLSPQPDTETAQPTKKITLKSSDNQIFEVEEAVAMEFATVKSFFE
DSPSSTDTVPLPNVTAKPLSQVIEFCKEQIKFKANPDEAQKKKYHSEFLKEKSDKDLVDM
IPVANYLEIKDLLDVLNQAVADRIENKSVEYVRGFFGIDSDFTAEEEAALRQEHAWAYEG
VDED
NT seq 555 nt   +upstreamnt  +downstreamnt
atgtcttcctcgaccgatagtcccaccctgacgaccgagaccacccagctttcaccccaa
ccagacactgaaacagcccaacccaccaagaaaatcaccctcaaaagctctgataaccag
atctttgaagtagaagaagctgtagccatggaatttgcgactgtgaaatctttctttgaa
gactcaccgtcatcgaccgacactgtgccactccctaatgtgacggccaagccattgtcc
caagttattgagttctgcaaggagcaaataaagtttaaagcaaacccagatgaagcacag
aagaaaaagtaccattcggagtttcttaaagaaaagagtgacaaagatctggtggatatg
attccggtggctaactatttggagattaaagatttgcttgatgtgcttaaccaggctgtt
gctgataggattgagaacaagagtgttgaatatgtgagaggcttctttgggattgacagc
gattttactgctgaagaagaggctgcgcttcgtcaagaacatgcttgggcttatgaaggt
gttgatgaggactaa

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