KEGG   Populus nigra (Lombardy poplar): 133695072
Entry
133695072         CDS       T10372                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133695072
Membrane trafficking [BR:pnz04131]
 Autophagy
  Other autophagy associated proteins
   Others
    133695072
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR5 WD40_CDC20-Fz ANAPC4_WD40 WD40_Prp19 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_RSE1_2nd Beta-prop_Vps41 Beta-prop_VPS8 CFAP251_N Beta-prop_IFT140_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 SpdB Ge1_WD40 PD40
Other DBs
NCBI-GeneID: 133695072
NCBI-ProteinID: XP_061972837
LinkDB
Position
5:22171944..22175090
AA seq 384 aa
MATRPGCDFEPDHPKTSSAAAAAITHNPNRVATPPIYHLSFNQNHTCFLVGLQNGFRIFD
TDPFKPSFRRDIDTHGGIGLVAMLYRSNIFCLVCGGPDPIYPRNKVMIWDDHDSRCIGEL
SFRSEVKNVKLRRDMIVVVLNQKIFVYNFLDLKLLNQIETVSNPTGLCEISHNSSPMVLV
CLGLQKGQIRVENFGSKKSKFVMAHDSRVVCMSLTQDGRRLATASSKGTLIRVFNSLDGT
LLQEVRRGVDRADIYSLAFSSNAQFLAVSSDKGTVHIFSLKVDSGSLPSLPNDRSHFASE
PIHSRLSSLSIFKGVLPKYFSSEWSVARFRLPEGLQYCVGFGHQKNTIVIIGMDGSFYRC
EFDPVTGGEMIQLEYINFLNVENF
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcgacccgtcccgggtgcgatttcgaacccgaccatcccaaaacctcttccgccgcc
gccgccgccataacccacaacccgaatcgagtagcaaccccgccaatctaccacctatcc
ttcaaccaaaaccacacctgcttcttagttggactccaaaacgggttccggatcttcgac
acggacccattcaaaccctcattccgccgcgacatagacacacacggcggcattggattg
gtcgccatgctttaccgcagcaacatcttctgcctagtctgtggcggacccgaccctatt
taccccagaaacaaagtgatgatttgggacgaccatgattctcggtgtatcggagaatta
tcgttccggtcagaggtgaaaaatgtgaaacttcgtcgcgatatgatcgttgttgtgttg
aatcaaaagatctttgtttataatttcttagacttgaagttattgaatcaaattgagacg
gtttcgaaccctactggactgtgtgagatttcgcataattcgtcgccgatggttttggtt
tgtttagggttgcaaaaggggcaaattagagtggagaattttgggtccaagaagagtaag
tttgttatggcgcatgattcaagagttgtttgtatgagtttaactcaagatgggaggagg
ttagcgacggcgagcagtaaagggactttgattagagtgtttaattctttggatggtact
ttgttgcaagaggttaggagaggtgtagatagagcagacatctacagccttgcattctca
tccaatgctcagttcctagctgtctcaagcgacaagggaactgtacatatctttagtctc
aaggttgattcagggtccctgccctcattgccaaatgatagatctcactttgcatctgaa
ccaattcattctagactttcatctctttccattttcaaaggggtattgccaaagtatttc
agctctgagtggtcagtagctcggtttcgattacctgaaggtttgcagtactgtgttggg
tttggccaccagaagaacaccattgtcatcattggcatggatggaagcttctatagatgt
gagtttgaccctgtgactggtggggagatgatccagcttgaatatatcaatttcctgaac
gtggagaatttctga

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