Populus nigra (Lombardy poplar): 133695123
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Entry
133695123 CDS
T10372
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133695123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133695123
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133695123
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
133695123
NCBI-ProteinID:
XP_061972929
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Position
5:complement(5395393..5401681)
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AA seq
568 aa
AA seq
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MVLVSAARDYVNRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKS
KESMSHLKAVYFLRPTLENIQHLRRQLANPRFGESHLFFSNMLKDTQIHILADSDEQEVV
QQVQEYYADFVAIDPYHFTLNIPSNHMYMLPAVVDPPGLQQFCDRIVDGISTVFLALKRR
PVIRYQRTSDIAKRIAQETSKLMYQQESGLFDFRRTEISPLLLIVDRRDDPVTPLLNQWT
YQAMVHELIGIHDNKVDLSSTGKLPKDQQEVVLSSEQDAFFKANMYENFGDIGMSIKRMV
DDFQQVAKSNQNIQTIEDMAKFVDSYPEYRKMHGNVSKHVTLVTEMSKIVGERRLMLVSE
REQDLACNGGQVAAFEAVTNLLNNESVSDIDRLHLVMLYALRYEKESPVQLMQLFNKLAS
QSPKYKPGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT
MESIIKGRLRDVDYPFVGNHFQQGRPQDVVIFIVGGTTYEESRSVALQNASNSGTRFILG
GSVVLNSKRFLKDLEEAQRVAKSSTNVV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctagtatccgctgcacgtgattacgtgaaccggatgttgcaggacatctccggt
atgaaggttctcattctcgattcccaaacggttagtattgtaagtgttgtgtattcacaa
tcagaattactacaaaaggaggtatttttggtagaattggtagattctatatcgaagtcg
aaagaatcaatgtcccatcttaaagcagtatacttccttcgcccaacattggagaatatt
cagcatttgcggcgtcagctggctaatcctagattcggagagagtcatttatttttctcc
aacatgttgaaggatactcagattcatatattagctgattcggatgaacaggaagttgtg
cagcaagttcaggagtattatgcagactttgttgcaattgatccttatcatttcactttg
aacatcccttcaaatcacatgtatatgcttccagcggttgtagatcctcctggtttgcaa
cagttctgtgatagaattgttgatggcatatcaacggtctttttggcattgaaacgaaga
cctgttattcgatatcaaaggacctctgatattgcaaaaaggatagcacaggaaacatca
aagcttatgtaccagcaggaaagtggcctttttgatttcagacgtacagagatttctcct
ttgttgcttatagttgatcgaagggatgaccctgttaccccattattaaaccaatggaca
tatcaggctatggttcatgaattgataggtattcatgataacaaagtggatttgagtagt
actggaaaattacccaaagaccagcaggaggttgttttgtcatcagagcaagatgccttc
ttcaaagctaatatgtatgagaactttggagatattggaatgagcatcaagaggatggtg
gatgattttcagcaagttgcaaaaagtaaccaaaacatccaaacaatagaagacatggcc
aagtttgttgacagttaccctgagtacagaaaaatgcacggcaatgtttcaaagcatgtg
acattggtcacagaaatgagcaagatagttggagagcgaaggctgatgttagtttcagaa
agggaacaggatttggcttgcaatggtgggcaagtggctgcatttgaggcagtgacaaat
cttctaaacaatgaaagtgtttctgatattgaccgactacacttggtaatgttatatgca
ttgcgctatgagaaggagagccctgttcaattaatgcagctttttaacaaactggcttct
caatctcccaagtacaagcctgggctagtccaattcctcctgaagcaagcaggtgtggat
aagcgtaccggggatctttatgggaaccgagatcttctgaacattgctcgtaacatggca
cgtggtcttaagggggttgaaaatgtatacacccagcaccagcctcttctgttccaaact
atggaaagcataatcaaggggcggttgagagatgtggactacccatttgttggaaatcac
tttcaacagggaaggccgcaagatgtggttattttcattgttggtggaacaacatatgag
gagtcacgctctgttgctctccaaaatgccagcaattctggaactcgttttatccttggt
ggttctgtggttctcaattctaagaggttcctgaaggacctggaagaagctcagagagta
gctaaatccagcaccaacgtggtttga
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