Populus nigra (Lombardy poplar): 133695131
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Entry
133695131 CDS
T10372
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133695131
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133695131
Protein recycling
Other Rab GTPase associated proteins
133695131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
133695131
NCBI-ProteinID:
XP_061972943
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Position
5:complement(7336095..7341065)
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AA seq
516 aa
AA seq
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MENSDISLGLHDFLERMRHPSAADFVKSIKSFIVSFSNHAPDPERDSALVQEFLANMETA
FKAHPLWAGCSEEELESAGEGLEKYVMTKLSSRVFASVPDDVEVDKQLSEKISLIQQFIR
PENLDIKPAFQNETSWLLAQKELQKVNLYRAPRDKLVCILNCCKVINNLLFNASMASNEN
PPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRCQSRLVGEAAYFLTNILSAESFISNI
DAKSLSMEESEFEKNMELARDLTGLSTDLNGLSTQSDQNAGNNSRAELMESKHRALSSKK
ERDLSIGSRSSEVTSMSKDLQYAKDESPMEKISSLSDIENKGATLLLKEDLTSQVLREYP
YLFASVGDLTINDVEGLLNNYKQLVFKYVCLSKGLGVANPSLPLTSSQTQVHGDVKTLNY
DQNTTAVEANKESRKHTGMTDGLNMVSLVDEENVELKPRNHQDSTAGEPNDESQTHTSMT
DGSNMLSLVGEEILVSKPKQNEAMVSQYEGKDENSQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcggacatatcgctgggattgcacgacttcctagaacggatgcgccatcca
tccgccgccgattttgtcaaatccattaaaagctttatcgtctccttttcaaaccatgct
cctgatccggaaagggacagtgctctcgtgcaggagttccttgccaacatggaaacggct
ttcaaggctcatccgctttgggctggttgctctgaggaggagctcgagagtgctggcgaa
ggacttgagaagtatgttatgacaaagttatcttcccgtgtatttgcttcagttccagat
gacgtggaagttgataagcaactttctgagaagatatccttgattcaacagttcattcga
ccagaaaatttagatattaagcctgcctttcaaaatgaaacatcatggctgcttgcccaa
aaagagctgcaaaaggttaacttatacagagcaccaagagacaagcttgtgtgtatcctc
aattgttgcaaagtcataaataatttactgttcaatgcctcaatggcttcaaatgagaat
cctcctggagctgatgaatttcttcctgttttgatttatgtcactataaaggcaaatccc
ccacaactgcactcgaatttgttgtatattcaacggtacaggtgtcaatctcgactagtt
ggagaagcagcctattttcttacgaacattctctctgcagagtctttcatctcaaacatt
gatgcaaaatcactttcaatggaggaatctgaatttgaaaaaaacatggaacttgctcga
gaccttactggcctttcaactgatttgaatggtctgtctactcaaagtgatcaaaatgca
ggaaacaattccagagcagaacttatggaatccaaacatcgagctttgagctctaagaag
gaaagggacttgtcaattggatctagatcttctgaagtgacatctatgagtaaggatctg
caatatgccaaagatgagtcgccaatggaaaagatttcatcactctcagatatagagaat
aaaggagcaactttgcttttgaaggaggatctgacaagtcaggtccttagagaataccca
tacttgtttgccagtgttggtgatctaacaatcaatgatgtagaaggcctactaaataat
tacaaacaacttgtcttcaagtatgtttgtctttctaaagggctgggtgttgctaatcca
tctcttcctttgactagttctcagacgcaagttcatggtgatgtcaaaactctgaactat
gaccaaaataccacagcagtagaggcaaataaagagtcacgtaaacatactggtatgaca
gatggtttaaatatggtttcccttgttgacgaagagaatgttgaattgaagcccaggaac
catcaagatagcacagcaggagagccaaatgacgagtcacagacacatactagtatgaca
gatggttcaaatatgctttcccttgttggtgaagagattcttgtatcaaagcctaagcag
aacgaggcaatggtgtctcagtatgagggaaaggatgagaattctcaatga
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