KEGG   Populus nigra (Lombardy poplar): 133695421
Entry
133695421         CDS       T10372                                 
Name
(RefSeq) F-box protein SKP2B
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133695421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133695421
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     133695421
SSDB
Motif
Pfam: LRR_6 LRR_4 LRR_At5g56370 LRR_Zer-1 F-box-like LRR_8 F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 133695421
NCBI-ProteinID: XP_061973397
LinkDB
Position
5:complement(5609880..5612801)
AA seq 377 aa
MAGEGKARSEDLNLCFEKLMLLAFGGGKSGSSEGGVKMEGAVITEWKDIPVELLLRIVSL
VDDRTVIMASGVCCGWRDAICMGLTHLCLSWCKKNMNNLVLSLAPKFTKLQTLVLRQDKP
QLEDHAVETIARYCHDLQDLDLSKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDAGLE
YLTKFCQKLKILNLCGCVKGATDRALQGIGRNCSQLQSLNLGWCEGVGDVGVMSLAYGCP
DLRTLDLCGCVCITDDSVIALANRCPHLRSLCLYYCRNITDRAMYSLVRNRVKNKLSMWE
SMKGRCDEEGLRSLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCV
CAVQAHRPASSFPHPAH
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcaggtgaaggaaaggcgaggagtgaagacttgaacttgtgtttcgagaagctgatg
ctgcttgcttttggtggtggaaagagtgggagtagtgaaggaggtgtgaaaatggaaggt
gcggtgatcaccgagtggaaagatattcccgtggagctgttgttaaggattgtttctctt
gttgatgataggactgtgattatggcttccggggtttgttgtggatggagggatgctatt
tgcatgggactcacccatctctgtctctcttggtgtaaaaagaacatgaacaacttggtt
ctctctcttgctcctaaatttacaaaactccaaactcttgtgctgcgccaggataaacca
caacttgaggatcatgctgttgagactattgctaggtactgccatgatctgcaggacctg
gatctcagcaaaagctttaagctcagtgatctctctctgtatgcattagctcacggttgt
ccaaatcttacaaaactcaacatcagtgggtgtacggcatttagtgatgctggtcttgag
tatcttaccaagttttgccaaaaattaaagatcttgaatctctgtggatgcgtcaaaggt
gcaactgaccgtgccttgcagggtattggacgcaactgcagtcagttgcagtctttgaat
ctgggatggtgcgagggcgtgggtgatgttggagtaatgagtttagcttatggatgtcct
gatctcagaaccctcgacttgtgtgggtgtgtctgtataacagatgatagcgtgattgct
ttggcaaacaggtgtccccatctgagatccctctgtctgtactactgccgaaacatcacg
gatagagcaatgtattcccttgtccgcaatcgagtgaagaacaagctttcaatgtgggaa
tcaatgaaaggcaggtgtgatgaggaaggattgaggagtctaaatatcagtcagtgcacg
gcactcacacctcctgctgttcaggctctatgtgactcgtttcctgcacttcacacctgc
tcagggaggcattccctcgtcatgagtggctgtttgaacttgacatctgtgcactgtgtc
tgtgctgtccaggcacaccgccctgcaagttcttttcctcatccagcacattga

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