Populus nigra (Lombardy poplar): 133695478
Help
Entry
133695478 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133695478
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133695478
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133695478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
CC_Bre1
COLEC12
Laminin_I
TEX13
DUF1598
HAUS-augmin3
FapA
T4bSS_IcmS
DUF3450
THOC7
CREPT
UPF0242
Motif
Other DBs
NCBI-GeneID:
133695478
NCBI-ProteinID:
XP_061973477
LinkDB
All DBs
Position
5:complement(18425607..18430932)
Genome browser
AA seq
507 aa
AA seq
DB search
MNSAFSEQILADKLSKLNGTQQCIESLSRWCIHHRSKAELVVETWNKQFHNSDMLKKVPL
LYLANDILQNSKRKGNEFVAEFWKVLPAALKNVVEKGDDRDKNVVSRLVNIWEERTVFGS
HARSLREVMLGEDVPPPLELSKKRSRTVKNTKRDSRSIRTKFSIGGAAEKIVSAFNLMVS
EQPNEEAEMRNCKSAVRRVRNMEKDVDIACSNNDKDPKRKTLAKELEDNENLLKRSIEKL
KSAKASRSALVSQLKEALQEQESELEGVRTQIQDAQAQVEEASKMRRRLNGEVLKASSTT
TVPVDSNAKAGQTPKRTAAAIAAEVAEKLAASSSSQMIMHAVLSTFAAEEAKNAPKPETS
LPVSDPNVFMLAQPLTAPTTHSYRSVLLTQPTMQNQTPTTQSQFHILPNPSSQPYIQPGG
GIATPYAYGNFSVLPPGPPPPPPYKVSQTVPLAQQPSQMPQQQTLPVAQQEAPINQKQPR
SLTQQTLGANFRPQPPGLEFYGHPSHS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgcatttagtgaacagatacttgcagataagctttccaagctcaacggcacc
cagcagtgtatcgagtctttgtctcggtggtgcatacatcaccgtagcaaagcagaatta
gttgttgagacatggaataaacagttccacaactcagatatgctcaagaaagtacctcta
ttgtatcttgcaaatgacatccttcagaacagtaagcggaaaggaaatgaattcgttgcg
gagttttggaaagttcttcctgcagcgctaaaaaatgtagttgaaaaaggtgatgatcgt
gacaagaatgtcgtctctagattggtaaatatatgggaagaaaggacagtatttgggtca
catgcccggagcctcagagaggtaatgcttggagaagatgtacctccacccttggagctc
agcaaaaaacgttcacgcactgtgaaaaatacaaagcgagattcacgatccattagaacg
aaattttccattggaggtgctgctgaaaaaatagtatcggcattcaatttgatggttagt
gagcagcccaatgaagaggcagagatgaggaattgcaagtctgcagttcgtcgtgtgagg
aatatggagaaagatgttgatattgcctgtagtaataacgataaagatccaaaacgaaaa
acattggctaaggagctagaggataatgagaatcttttgaaacgaagtattgagaaactt
aaatcagctaaagcaagtagatcagcgcttgtctctcagttaaaagaagctctacaggaa
caggaatctgaactggagggagttcgaactcagatacaggatgcacaggcacaagtagag
gaagccagcaagatgcgaaggcggcttaatggtgaagtattaaaagcatctagtacaact
acagtaccagttgattcaaatgcaaaagcaggacaaacacccaagaggacagctgcagct
attgctgcggaggttgcagagaagcttgcagcttcctcctcttctcaaatgatcatgcac
gctgttctctctacatttgccgctgaagaagcaaagaatgctccaaaacctgaaacctct
ttacctgtttcagatccaaatgtttttatgctagctcagccactcactgctccaacaaca
cattcgtaccggtcagttttgttgacccaacctacaatgcagaaccagactccgaccact
caatcgcaatttcacattcttcccaacccatcctctcagccttatatacagccagggggt
gggattgcaaccccgtatgcttatggtaacttttctgtgttgcctccaggaccaccgcca
cccccaccctataaggtaagtcaaaccgtgcccttggctcaacaaccatcgcaaatgcct
cagcagcaaacgttaccagtggcacaacaggaggccccaataaaccagaaacaacccagg
tctttaactcaacaaaccctgggcgctaatttcagacctcaaccacctggattggagttc
tatggccacccatctcattcttag
DBGET
integrated database retrieval system
