Populus nigra (Lombardy poplar): 133695822
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Entry
133695822 CDS
T10372
Name
(RefSeq) protein FIZZY-RELATED 3-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133695822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133695822
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
133695822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WDR90_beta-prop_4th
NBCH_WD40
Tricorn_2nd
Beta-prop_SPT8
Aldo_ket_red
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
133695822
NCBI-ProteinID:
XP_061973756
LinkDB
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Position
6:complement(3292026..3295637)
Genome browser
AA seq
485 aa
AA seq
DB search
MDSTPRRKSGLNLPSGMNETSLRLETFSSSSSFRAVTCVSSPRAISSLSSPSKTSSCSDR
FIPCRSSSRLQTFGLIEKGSPVKEGGNEAYARLLKSELFGSDFGSFSSPAGGQGGLGSPS
KNMLRFKTDHSGPNSPYSPSILGHDSGISSESSTTPKPPRKVPKTPHKVLDAPSLQDDFY
LNLVDWSSQNVLAVGLGTCVYLWTASNSKVTRLCDLGPNDSVCSVQWTREGSYISIGTHL
GQVQVWDGTQCKRVRTMGGHQTRTSVLAWNSRTLASGSRDRNILQHDLRVSSDHVSKLIG
HKSEVCGLKWSHDDRELASGGNDNQLLVWNQHSQLPVLTLTEHTAAVKAIAWSPHQSGLL
ASGGGTADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYP
SLSKVATLVGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTQTIVKDTGLWSLG
RTQIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggattctacaccaagaagaaagagtggcctcaacctcccatctgggatgaatgagact
tctttaagactggagaccttttcttcttcaagttcttttagagcagtcacatgcgtatca
tcaccaagagcaatatcaagcttatcttcaccctcaaaaacctcttcttgtagtgataga
ttcataccttgcagatcatcttcaaggctacaaacttttggactcatagagaaaggatct
cctgttaaagaaggaggcaatgaggcgtatgcaaggttgttgaaatctgagctttttggg
tctgattttggttccttttcttctcctgcaggtggtcaaggagggttgggtagtcctagc
aagaatatgttgaggttcaagactgatcattcaggccctaattcgccgtattctccttca
atcttgggacatgatagtgggatttctagcgagtcttctactactccgaagccaccaaga
aaagtccctaagacaccccataaggttttggatgccccatcacttcaagatgacttctat
ttgaatcttgtggattggtcctcacagaatgtactcgcagttgggctgggaacttgtgtc
tatttatggaccgcatcaaatagtaaagtgaccaggctgtgtgatttagggcctaatgac
agtgtatgctccgtgcaatggacccgggaaggctcatacatatcaattggcacacatctt
ggtcaagttcaggtgtgggatggaacacagtgcaagagggtccgaaccatgggcgggcat
caaacaagaacaagtgtcttggcttggaactctaggacactagcatcaggaagcagggac
cgcaacatacttcagcatgatcttcgagtttctagtgaccatgttagcaaacttattggt
cacaaatctgaggtatgtggcttaaaatggtctcatgatgacagagaacttgcatcaggt
ggaaatgataaccagctcttggtatggaaccagcactcgcagctaccagttttgacattg
acagaacacacagctgctgtcaaggccattgcttggtcaccccaccagagtggtctcctt
gcatctggaggtggaactgctgatcgatgtattcgcttttggaacaccaccaatggtcat
cagttaaaccatgttgacacaggaagccaggtctgcaatctagcctggagcaagaatgtt
aatgaactggtcagcactcatgggtactcccagaatcaaatcatggtgtggaaatatcca
tcgttatccaaggttgcaactctagttggtcacagtatgcgagtcctctatcttgccatg
tctcctgatggtcagacaatagtaactggagcaggggatgagacgttgaggttttggaat
gtgtttccatctatgaaaacgcagacaatagtgaaagatacaggactttggtcattagga
agaacccagattcggtga
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