Populus nigra (Lombardy poplar): 133695861
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Entry
133695861 CDS
T10372
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133695861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133695861
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133695861
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133695861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133695861
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133695861
Messenger RNA biogenesis [BR:
pnz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133695861
Chaperones and folding catalysts [BR:
pnz03110
]
Heat shock proteins
HSP60 / Chaperonin
133695861
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133695861
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133695861
Exosomal proteins of other body fluids (saliva and urine)
133695861
Exosomal proteins of breast cancer cells
133695861
Exosomal proteins of colorectal cancer cells
133695861
Exosomal proteins of bladder cancer cells
133695861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DD_K
Motif
Other DBs
NCBI-GeneID:
133695861
NCBI-ProteinID:
XP_061973811
LinkDB
All DBs
Position
6:7691675..7697150
Genome browser
AA seq
592 aa
AA seq
DB search
MACSPSLISAISLTNPTRLKRVSSPSMLSPKAMAKEIYFNHDGSTTKKLLAGVEMVSELL
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNNLAGD
GSTTSVVLAHGLIAEGQKVIASGMNPVQIARGIVKTSEALVSELKLMSREVENDELADVA
AVSAGNDYTVGNMISDAIQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDR
QRMVVEFHNCKLLLVDKKIQNAKEVFKILDNAVKEMYPIVIVAEDVDQEALAPIIRNKLK
GLLKGVAIKAPAFGERKSHYLDDIAILTGGTVIRDDMGLKLEKAGKEVLGTATKVVITKD
STLIVTDGSTREAVEKRVSQICSLVENTEEKFQKKILNERIARLSGGIAILQVGAQTQVE
LKDKLLRIEDALNATKAAIEEGVVVGGGCSLLRLSTKVDGIKELLDNEEQKIGAEIFKRA
LSYPARLIAKNAGVNGNVVINQVLSNTDVRYGYNAATDTYEDLIAAGIIDPTKVVRCCLE
HATSVAKTFLTSDAVVVDIKESDPLPMRKRMPPVAPPPMPKSPGVGPVGVYL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctcgccatctctaatctctgcaatatctctcactaacccaacaaggctcaag
agggtctcctctccttctatgttaagcccgaaagccatggccaaggaaatttacttcaac
catgatggttcaaccacgaagaaacttctggcaggggtggagatggtgtcggagttatta
ggagtgactttaggaccgaaaggaaggaatgtggtgttgcagaacaagtatggacctccc
aagattgttaatgatggagaaactgtcctcaaagagattgaactggaggatcccttggag
aatgttggagtaaaattggtgaggcaagctggtgcgaaaacaaataaccttgctggtgat
ggttcgacaacatctgtggttcttgctcatggtttaatcgctgagggtcaaaaggtgatt
gcatctggcatgaatcctgttcaaattgctcgtgggattgtgaaaacctcggaagctctt
gtatctgaactcaaattgatgtcgagggaggttgagaacgatgagcttgcagatgttgct
gcagttagcgcagggaatgattatacagtgggaaacatgatatccgatgcaattcaacaa
gtgggaagaaggggagtagtcacaattgagaaaggaaggtgtactgagaacatcctagaa
attgtagaaggaatgcaattcgatcgtggatatttgtctccttacttcgtaactgatcgg
caaagaatggtagtggagttccacaactgcaagctactcttggttgacaaaaaaatacag
aatgcaaaggaggtgttcaaaatattggataatgcagttaaagagatgtacccaattgta
atagttgcagaggatgtggaccaggaagctctggctccaatcattaggaacaaactcaag
ggtctattgaagggagttgctattaaagctcctgcctttggtgaacggaagagccactac
ttggatgacatcgctatcttgacaggaggcactgtaattagagatgatatggggctgaag
ctagaaaaggctgggaaggaggtgttgggcactgctactaaggtggtgataacaaaagat
tctacgttgatagtaactgatgggagcactcgagaagctgtggagaaaagggtttctcag
atatgtagtcttgttgagaacactgaagaaaaatttcaaaagaaaatattgaatgaaaga
atagcaaggttatctggagggattgctattctgcaggtaggagcacagacacaagtcgag
ttgaaggacaaactgctgagaattgaggatgctttaaatgcaaccaaggcagcaattgag
gaaggtgtagtagttggaggtggttgtagccttttgaggctatcaactaaggtggatggt
attaaagaacttttggataatgaagagcagaagattggagctgagatcttcaaaagagct
ttgagctatcctgcacgattaatagctaagaatgcaggtgtaaatggaaatgtcgtcata
aaccaggttttgtcaaatactgatgtaagatatggatacaatgctgcaacagacacgtac
gaggatttgatagctgctggaattatagatcccacaaaggtggttagatgttgtttggag
catgcaacatcggtggccaagacattcctgacatccgatgctgtcgtagttgacatcaag
gaatcggatcccctcccaatgaggaaacgaatgccaccagtagcccctcctcctatgcca
aaatccccaggtgttggaccagttggcgtatacttgtag
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