Populus nigra (Lombardy poplar): 133695886
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Entry
133695886 CDS
T10372
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133695886
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
133695886
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
133695886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
UBA_ARIH2_N
Rcat_RNF216
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
133695886
NCBI-ProteinID:
XP_061973836
LinkDB
All DBs
Position
6:complement(4799454..4809886)
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AA seq
592 aa
AA seq
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MDSEDEFDMQDAAAESAEDDFYSGGEEDGFDSDDADVADYEFIDNDSDDSDDLISHRHQQ
NYTVLSEEDIRQRQDDDVMRIATVLSISKFAASILLRYYNWSVSKVHDEWFADEEKVRKA
VGLLEERVVPFPDGREMTCGICFETYPSDRLLAAACGHPFCNSCWAGYISTAINDGPGCL
MLRCPDPSCNAAIGQDMINLLTSNEDSEKHSRYFIRSYIEDNRKTKWCPAPGCDYAVDFI
VGSGSYDVTCRCAYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKC
KRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAE
KRREMAKNSLERYTHYYERWATNQSSRQKALADLQQMQNVHLEKLSDIQCQPESQLKFII
EAWLQIVECRRVLKWTYAYGYYLPEHEHAKRMFFEYVQGEAESGLERLHQCAEKELQTYL
NAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGTCSSRTASSKSLGGG
SSRARAGRGKGSTSRSSGPSRIIDDPGHWSCEHCTFANIKPATICAMCQQRR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggattcggaggacgagttcgatatgcaagacgcggctgcggaatcggcggaggatgat
ttctacagcggcggagaagaagatggtttcgacagcgacgatgctgacgtcgccgattat
gagttcatcgataacgactcggatgattccgatgatctcatctctcatcgccaccagcaa
aactatacggttttgagtgaagaagatatacggcagcgacaagatgatgatgttatgagg
atagctactgtgctttccatctcaaagtttgcggccagtatacttctccggtactataac
tggagtgtgagtaaagtgcatgatgaatggtttgcggatgaggaaaaggttcgaaaggct
gttggtttactggaggaacgggttgttccatttcctgatggtagagaaatgacttgcggg
atttgtttcgaaacttatccttctgatagattgcttgctgctgcttgtggtcatccgttt
tgcaattcatgctgggcaggttacatcagtacagccattaatgatggtcctggatgtttg
atgttgcgatgtcctgatccatcttgtaatgctgctattggtcaagatatgattaattta
ttgacttctaatgaagacagtgagaaacattctcgttatttcataagatcttatattgag
gacaatagaaagaccaaatggtgccctgctcctggctgtgattatgctgtggattttatt
gttggcagtgggagctatgatgttacctgccgctgtgcatacagcttctgctggaactgt
actgaggaagctcaccgacctgttgattgtggtactgtggccaagtggatactgaagaac
agtgctgagtctgaaaatatgaactggatattggctaattccaagccttgcccgaagtgc
aagcgaccaattgagaaaaatcaagggtgtatgcatataacatgcacaccaccttgcaaa
tttgaattttgttggctttgccttggtgcatggtcagatcatggagagaggacaggtggt
ttttatgcatgtaaccgttatgagactgcaaagcaagagggagtgtatgacgaggctgag
aagcgaagagaaatggccaagaactctctggagagatacacacattattatgaaagatgg
gcaaccaatcaatcatctcggcaaaaggcattggcagacctacagcaaatgcaaaatgta
catcttgagaagttgagtgacatacagtgccaacctgagtcacagctgaagttcataata
gaggcctggctacagatagttgaatgtaggcgagttctaaaatggacttatgcctatgga
tattatttacctgagcatgaacatgccaagaggatgttctttgagtatgtgcaaggtgag
gccgagtctggattggagcgacttcatcaatgtgcagagaaggagctccaaacttaccta
aatgcagagggcccgtcaaaagattttaacgagttccgcacaaaacttgctgggttgacc
agtgttactcggaactactttgagaatttagtccgggctttagagaatggtctatcagat
gtggattcccatggtacatgcagcagcagaacagcaagctcgaagagcttgggaggtggt
agcagtagggcaagagctggtagaggcaagggctcaacatctaggtcaagtggacctagt
agaattattgatgacccaggccactggtcctgtgaacattgcacctttgctaatattaag
ccggccaccatttgtgcgatgtgccagcaacgacggtaa
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