KEGG   Populus nigra (Lombardy poplar): 133695900
Entry
133695900         CDS       T10372                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz00040  Pentose and glucuronate interconversions
pnz01100  Metabolic pathways
Module
pnz_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    133695900
Enzymes [BR:pnz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     133695900
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD Nab2-zf4 pAdhesive_6
Other DBs
NCBI-GeneID: 133695900
NCBI-ProteinID: XP_061973857
LinkDB
Position
6:464303..466251
AA seq 393 aa
MAHYTLSSCVLLALLVMVFTSYLAIAEQHNVLSYGAKPDGRTDSTTSFLAAWAQACGSIS
PSTIYVPPGRFFLQNVEFKGPCKNKAIVVRIDGTLLAPTDYRIIGNAGNWILFQNVDGLT
VSGGVLDGHGSGLWDCKRSGKNCPSGATTLRFSNSNNVVISGLTSLNSQMFHIVINCCNS
VKIQGVRITASGNSPNTDGIHVQLSSNITILSSKIGTGDDCVSIGAGTTNLWIENVVCGP
GHGISIGSLGKDLNEPGVQNVTAKTITFIGTQNGLRIKSWGRPSSGFVRNVLFQHAAMTN
VQNPIVIDQNYCPDNINCPGQASGVKISDVIYQDIHGTSATQVAVRFDCSKKFPCTGIKM
EDVKLTYKNQPAGASCNNADGTTSGVIQPNSCL
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggcacattatacgttaagctcttgtgttcttcttgcccttcttgtcatggtctttacc
tcatatttagcaattgcagaacaacacaatgtcctgagttatggggcgaagccagatggt
agaactgactcgaccacatcctttcttgctgcttgggcacaagcatgtggctccattagc
ccatctaccatttatgtcccgccaggcaggttctttctacaaaatgtagagtttaagggt
ccatgcaagaacaaagcgatcgttgtacgtatagatggcacacttctagctccgaccgat
tatcggattattggtaatgctggaaactggattctctttcagaatgttgatggtcttacg
gtttctggtggggttctagatggacatggctctggtttgtgggattgcaagcgatctggc
aagaactgcccaagtggtgccacgacactacgcttttccaattcaaacaacgtagtgatc
agtggattaacttcattgaatagccaaatgttccacattgttatcaattgttgcaacagc
gtgaagattcaaggggttaggattacggcttccgggaacagtccaaacacagacggcatt
catgttcaattatcgagcaacatcacaatcttgagctccaagattggaaccggcgacgat
tgtgtctcaatcggtgccggcacgactaacttgtggattgaaaatgttgtgtgtggccct
ggacacggaatcagcattggaagtttaggcaaggaccttaatgagcctggagtgcaaaat
gtgactgctaaaacgattacatttattggcactcaaaatgggttgaggatcaagtcttgg
gggaggcctagcagtggttttgttaggaatgtacttttccagcacgctgccatgaccaat
gttcagaatcccattgttattgaccagaactactgccctgacaacataaattgccctggc
caggcttctggggttaagattagtgatgtgatttaccaagacatacatggaacatcagca
acacaggttgcagtgagatttgactgtagtaaaaagttcccgtgcactgggatcaaaatg
gaggatgtgaagctcacttacaagaatcaaccagctggcgcatcttgtaacaatgctgat
ggaacaacttcaggtgtcatccagcccaatagttgcctttag

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