Populus nigra (Lombardy poplar): 133695900
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Entry
133695900 CDS
T10372
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Module
pnz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133695900
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133695900
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Nab2-zf4
pAdhesive_6
Motif
Other DBs
NCBI-GeneID:
133695900
NCBI-ProteinID:
XP_061973857
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Position
6:464303..466251
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AA seq
393 aa
AA seq
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MAHYTLSSCVLLALLVMVFTSYLAIAEQHNVLSYGAKPDGRTDSTTSFLAAWAQACGSIS
PSTIYVPPGRFFLQNVEFKGPCKNKAIVVRIDGTLLAPTDYRIIGNAGNWILFQNVDGLT
VSGGVLDGHGSGLWDCKRSGKNCPSGATTLRFSNSNNVVISGLTSLNSQMFHIVINCCNS
VKIQGVRITASGNSPNTDGIHVQLSSNITILSSKIGTGDDCVSIGAGTTNLWIENVVCGP
GHGISIGSLGKDLNEPGVQNVTAKTITFIGTQNGLRIKSWGRPSSGFVRNVLFQHAAMTN
VQNPIVIDQNYCPDNINCPGQASGVKISDVIYQDIHGTSATQVAVRFDCSKKFPCTGIKM
EDVKLTYKNQPAGASCNNADGTTSGVIQPNSCL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcacattatacgttaagctcttgtgttcttcttgcccttcttgtcatggtctttacc
tcatatttagcaattgcagaacaacacaatgtcctgagttatggggcgaagccagatggt
agaactgactcgaccacatcctttcttgctgcttgggcacaagcatgtggctccattagc
ccatctaccatttatgtcccgccaggcaggttctttctacaaaatgtagagtttaagggt
ccatgcaagaacaaagcgatcgttgtacgtatagatggcacacttctagctccgaccgat
tatcggattattggtaatgctggaaactggattctctttcagaatgttgatggtcttacg
gtttctggtggggttctagatggacatggctctggtttgtgggattgcaagcgatctggc
aagaactgcccaagtggtgccacgacactacgcttttccaattcaaacaacgtagtgatc
agtggattaacttcattgaatagccaaatgttccacattgttatcaattgttgcaacagc
gtgaagattcaaggggttaggattacggcttccgggaacagtccaaacacagacggcatt
catgttcaattatcgagcaacatcacaatcttgagctccaagattggaaccggcgacgat
tgtgtctcaatcggtgccggcacgactaacttgtggattgaaaatgttgtgtgtggccct
ggacacggaatcagcattggaagtttaggcaaggaccttaatgagcctggagtgcaaaat
gtgactgctaaaacgattacatttattggcactcaaaatgggttgaggatcaagtcttgg
gggaggcctagcagtggttttgttaggaatgtacttttccagcacgctgccatgaccaat
gttcagaatcccattgttattgaccagaactactgccctgacaacataaattgccctggc
caggcttctggggttaagattagtgatgtgatttaccaagacatacatggaacatcagca
acacaggttgcagtgagatttgactgtagtaaaaagttcccgtgcactgggatcaaaatg
gaggatgtgaagctcacttacaagaatcaaccagctggcgcatcttgtaacaatgctgat
ggaacaacttcaggtgtcatccagcccaatagttgcctttag
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